Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  220 bits (561), Expect = 1e-61
 Identities = 171/584 (29%), Positives = 281/584 (48%), Gaps = 54/584 (9%)

Query: 1   MKINTTMKLVFSAIGVGM-AITMATVFQLDSLEQQVDRLSLIRYQSYQAADELRQSSDDL 59
           M I     L F+ IG+ M  + + ++ Q+ ++ Q    +  +   S +  DEL   +  +
Sbjct: 6   MNIAPRALLGFALIGLLMLGLGIFSLVQMGNIRQAGVAIEQVSVPSIKILDELTALNLRM 65

Query: 60  TRLGRTYVVTGDEKYEKMYMDILDIRNGKKPRPESYHT---IYWDLVLQYGQKPKPDGQT 116
             L    ++  +   ++  +D+LD RN +  R    +    +  D    + Q  +   Q 
Sbjct: 66  RTLSYRLLLNREPATQRDTLDMLDQRNSQIDRARQAYLPMIVAADEQAAFDQYGQLLNQY 125

Query: 117 IALQQMMKDLGFSDREFALLKEAQN--NSDALVNMEVKAMNAVKGLFPDASGNYTVKGEP 174
             L+  M+ L  +DR    L E ++  N D L N E                        
Sbjct: 126 RQLESRMRTLSQADR----LDELRDLLNRDLLANSE------------------------ 157

Query: 175 DVNMAVQLLHSEEYHREKAKIMAPIDRFFQELETRTAQQFNQAAEQVKSTVLIGNISLVV 234
            +N                K+M  + R   + +TR   +  +AA Q      +    LV 
Sbjct: 158 QIN----------------KVMDTLVRINTD-QTRATNE--KAANQYAGAFALVIGLLVA 198

Query: 235 VAIIAIIGYVVVNRKIVTPIDRMASVLQRADDNSDLTLRVEEKSDDELAVIGRTINKVLG 294
             ++      ++ R IV PI+      ++  D  DLT  +  +  DE A + R + ++  
Sbjct: 199 ATVLTFACAFLLTRSIVKPIEEALKCAEQVADG-DLTHVIRAEGTDEAARLLRAMARMQD 257

Query: 295 SYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQQDQELEMAATAMEEMTSALSSVSQ 354
               T+ +I      ++S ++ + ++TD++ +   QQ+ E+E AATA+ EMTSA+  V++
Sbjct: 258 KLRDTLQQIAGSATQLASAAEELNAVTDESARGLQQQNNEIEQAATAVTEMTSAVEEVAR 317

Query: 355 STNMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATESNNVGNVLDV 414
           +     E +  A +   + + +  +T+     + G+ Q T+++I  LA +S ++G VLDV
Sbjct: 318 NAVSTSEASSEASRSTGDGRDLVMETVGAIERMSGDVQATAKLITHLAEQSRDIGKVLDV 377

Query: 415 IKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEIETMISMLQEK 474
           I+ +A+QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ+ST EIE MI  +Q  
Sbjct: 378 IRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMIGSIQGG 437

Query: 475 AEMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAATEEQLTVSDEI 534
            E + +++R S ++ +ST      A  +L  I G+  +I++ N  IA+A EEQ  V+ E+
Sbjct: 438 TEEAVESMRTSTERAESTLNIARGAGMALDTIAGAVAQINERNLVIASAAEEQAQVAREV 497

Query: 535 SSNLSTIKTLSGEMNLAIKQLGPVVVDLQRNVDDLNSAIAHIRT 578
             NL  I  LS +      Q      +L R   DLN  +A  RT
Sbjct: 498 DRNLVNINDLSVQSATGAHQTSAASAELSRLAVDLNGLVARFRT 541