Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., hypothetical protein from Pseudomonas lactucae CFBP13502

 Score =  204 bits (520), Expect = 6e-57
 Identities = 130/375 (34%), Positives = 211/375 (56%), Gaps = 2/375 (0%)

Query: 201 RFFQELETRTAQQFNQAAEQVKSTVLIGNISLVVVA-IIAIIGYVVVNRKIVTPIDRMAS 259
           R   E   R  ++   AA++++++ L   IS +V+A IIAII  V++ R I  PI +   
Sbjct: 163 RVMIESNNRQIKEGAIAADELRNSALTWMISGIVLAFIIAIIIGVLITRLITRPIAQAVQ 222

Query: 260 VLQRADDNSDLTLRVEEKSDDELAVIGRTINKVLGSYGSTISKINQVNHTISSISDTIRS 319
             QR     DLT  +  +  DE   +   ++ +     ST+ +I   +  ++S ++ + +
Sbjct: 223 SAQRIA-KGDLTQAIITERTDEAGQLLMALSDMQSGLKSTLMEIANASDQLASAAEELSA 281

Query: 320 ITDQNMKMSSQQDQELEMAATAMEEMTSALSSVSQSTNMAEEYAGSAEKEANNSKQVFEK 379
           +TD++ +  ++Q+ E++ AATA+ +MT+A+  V+ +     E +  A  EA + ++   +
Sbjct: 282 VTDESSRGLTRQNDEIQQAATAVNQMTAAVDEVASNAVSTSEASRQATTEAEDGREQVAQ 341

Query: 380 TIREFADLDGEFQKTSEIIQQLATESNNVGNVLDVIKAIAEQTNLLALNAAIEAARAGEQ 439
            +     +  E  ++++ ++ LA +   +GNV+DVI+AIA+QTNLLALNAAIEAARAGEQ
Sbjct: 342 AVSGMRSMVVEINESTQSVESLANQVREIGNVIDVIRAIADQTNLLALNAAIEAARAGEQ 401

Query: 440 GRGFAVVADEVRSLAQRTQESTGEIETMISMLQEKAEMSTKTIRVSADKMQSTRGNMGVA 499
           GRGFAVVADEVR+LA RTQ ST +IE MI  +Q  A+ +   +  S     +T+     A
Sbjct: 402 GRGFAVVADEVRALAHRTQVSTVDIEKMIGAVQVGADGAVAAMNKSLSWANNTQSLAQNA 461

Query: 500 NESLVAIQGSAKEIHKLNTSIAAATEEQLTVSDEISSNLSTIKTLSGEMNLAIKQLGPVV 559
            E+L  I  S  +I++ N  IA+A+EEQ  V+ E+  NL  I+ LS +      Q     
Sbjct: 462 GEALQRITASVAKINERNLVIASASEEQAQVAREVDRNLLNIQDLSTQTAAGAHQTNASS 521

Query: 560 VDLQRNVDDLNSAIA 574
            DL R     N  ++
Sbjct: 522 QDLSRLATSFNVLVS 536