Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 511 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score =  209 bits (533), Expect = 2e-58
 Identities = 128/392 (32%), Positives = 224/392 (57%), Gaps = 8/392 (2%)

Query: 186 EEYHREKAKIMAPIDRFFQELETRTAQQFNQAAEQVKSTVLIGNISLVVVAIIAIIGYVV 245
           ++ H+  A+++  +++ +       A+  +  AE  K+TVLI   S + + ++ ++   V
Sbjct: 127 DQLHQRAAQVVDRVNQAY------VAEDASMQAELKKNTVLIIGSSALAL-LVGLLAAWV 179

Query: 246 VNRKIVTPIDRMASVLQRADDNSDLTLRVEEKSDDELAVIGRTINKVLGSYGSTISKINQ 305
           + R IV P+  +  V Q+     DLT +VE    DE+  +   + ++    G+ +S +  
Sbjct: 180 ITRLIVAPLRSVIRVAQQIAAG-DLTAKVEVTRRDEMGQLMLAMQQMAAGLGTIVSGLQA 238

Query: 306 VNHTISSISDTIRSITDQNMKMSSQQDQELEMAATAMEEMTSALSSVSQSTNMAEEYAGS 365
               ++  + ++ ++T+Q     + Q +E E  ATAM +MT+ +  V+++   A   A +
Sbjct: 239 GIERLAGSAQSLSAVTEQTNLEVNSQKEETEQVATAMNQMTATVHDVARNAEEAALAAQT 298

Query: 366 AEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATESNNVGNVLDVIKAIAEQTNLL 425
           A+ +  + +QV  +++     L       S  I+ L+ E  N+G VL+VIK++AEQTNLL
Sbjct: 299 ADDKVESGQQVVRQSMARIEQLADSATSASSSIESLSAEIQNIGTVLEVIKSVAEQTNLL 358

Query: 426 ALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEIETMISMLQEKAEMSTKTIRVS 485
           ALNAAIEAARAGEQGRGFAVVADEVR+LA+RTQ+ST EIE ++S L+  A+ S + IR S
Sbjct: 359 ALNAAIEAARAGEQGRGFAVVADEVRALARRTQQSTEEIERLVSALRAAAQSSVQQIRSS 418

Query: 486 ADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAATEEQLTVSDEISSNLSTIKTLS 545
            + ++    +      +L +I  +   I ++N  IAAA EEQ +V++EI+ +++ I+  +
Sbjct: 419 GELVKLAVSDALQTESALGSIAAAVSLIQQMNQQIAAAAEEQSSVAEEINRSVTQIRASA 478

Query: 546 GEMNLAIKQLGPVVVDLQRNVDDLNSAIAHIR 577
              ++A++      V+L +   +L S + H R
Sbjct: 479 DHSSVAMRGNAASSVELAQLGGELRSMVGHFR 510