Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score =  196 bits (497), Expect = 3e-54
 Identities = 124/371 (33%), Positives = 208/371 (56%), Gaps = 2/371 (0%)

Query: 205 ELETRTAQQFNQAAEQV-KSTVLIGNISLVVVAIIAIIGYVVVNRKIVTPIDRMASVLQR 263
           EL  + A    +AA  V K + L   + + + A+I +   +++ R IV P+ +  SV + 
Sbjct: 168 ELNKQNAGLATEAARLVFKQSRLWVAVMIAMAALITVGLALLLTRSIVVPLSQSLSVAEV 227

Query: 264 ADDNSDLTLRVEEKSDDELAVIGRTINKVLGSYGSTISKINQVNHTISSISDTIRSITDQ 323
                DLT  +     DE A + + +  +  +   TI +I++ +  ++S ++ + S+T+ 
Sbjct: 228 VA-GGDLTGDIHITGKDEPARLLQALKSMQHNLRDTIRRISESSTQLASAAEELSSVTED 286

Query: 324 NMKMSSQQDQELEMAATAMEEMTSALSSVSQSTNMAEEYAGSAEKEANNSKQVFEKTIRE 383
             +   QQ QE+E AATA+ +MT+A+  V+ +     E +  +++ A   ++  ++T+  
Sbjct: 287 ATRGLHQQSQEIEQAATAVNQMTAAVEEVANNAVATSEASRESDRIARQGREQVQQTVTS 346

Query: 384 FADLDGEFQKTSEIIQQLATESNNVGNVLDVIKAIAEQTNLLALNAAIEAARAGEQGRGF 443
              L G+    +  ++ LA + + +  VLDVI++IAEQTNLLALNAAIEAARAG+ GRGF
Sbjct: 347 IEFLAGDVTNNAAQVEALAQKVHGISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGF 406

Query: 444 AVVADEVRSLAQRTQESTGEIETMISMLQEKAEMSTKTIRVSADKMQSTRGNMGVANESL 503
           AVVADEVR+LA RTQ+ST EIE MI  +Q+  + +  +++ S  + +ST      A  +L
Sbjct: 407 AVVADEVRALAHRTQQSTQEIEQMIGGIQQGTDSAVSSMQQSNSRARSTLELAKSAGSAL 466

Query: 504 VAIQGSAKEIHKLNTSIAAATEEQLTVSDEISSNLSTIKTLSGEMNLAIKQLGPVVVDLQ 563
             I  +   I++ N  IA+A+EEQ  V+ E+  NL  I+ L+ + +    Q      +L 
Sbjct: 467 EEIASAFTLINERNLVIASASEEQAAVAREVDRNLMNIRDLAMQTSAGANQTSAASQELS 526

Query: 564 RNVDDLNSAIA 574
           +   DLN  +A
Sbjct: 527 KLAVDLNGMVA 537