Pairwise Alignments

Query, 379 a.a., CdaR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., CdaR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  182 bits (462), Expect = 1e-50
 Identities = 115/375 (30%), Positives = 196/375 (52%), Gaps = 19/375 (5%)

Query: 3   LDSQLAQQIVDRTMAIIGYNINVMNQAGVIIGSGEKNRIGQVHDGAILALKHGDSVELTA 62
           LD  LAQ IVDRTMAI+ YN+NVM+  G+I+GSGE  RI   H+GA L L +G  VE+  
Sbjct: 4   LDHDLAQDIVDRTMAILPYNVNVMDSQGLILGSGEPERINTRHEGAQLVLANGRVVEIDG 63

Query: 63  ESCVALKGVKPGINMVLRNQQQVVGIVGITGEPKDIRDFANLVKMSAEMIIEQAALVEQL 122
           ++   LKGV+PGIN+ L +  +++G++GITGEP+ +R +A LV+M+AEM++       + 
Sbjct: 64  QTAKHLKGVQPGINLPLLHDGRLIGVLGITGEPEGLRTYAELVRMTAEMLVSHRHQQAEQ 123

Query: 123 QWDRRHREEFISAWIHNTLSAAELDAWAARLSIDLSKPRVAVVIAFRQPKSGQSLDQIRQ 182
           QW R+  ++ ++  +  T  +  L   A +L +    PR   +      +S ++L     
Sbjct: 124 QWRRQRCDDLLALLLAETGDSPRLVDEAQQLGLKPQLPRTPYLFELGAGQSAEALS---- 179

Query: 183 VVELLEHPERDNLVAVVSMQEIVVLKPCRTPEHWTSEYESLRID--KLMARLKAYDITGY 240
               L     D+     +   ++  +P            ++++D  +L+ +L A      
Sbjct: 180 --TWLTSRYPDSWCVSSAQFSLLWCRPA-----------AVQVDNPRLLEKLDALGWNVL 226

Query: 241 DIALGQLFINPNAIHLSYQSAKQVLRIGQVRQPEKQKHLYEELRLPVLLLPLNEGWQGEQ 300
            +A+G        +   Y+    +L  G+   P+ +       RLPV+L         ++
Sbjct: 227 RVAVGGQADGLAGLRRCYRRVGDLLAYGRDVLPQSRLLTLNRYRLPVMLWRHRNDDALDE 286

Query: 301 WRRVMQELQTQDKSGQLVKTLKGLFAANGNLNLCAQQLFIHRNTLRYRLEKITEITGIET 360
               ++++  +D +GQL+ TL+     +G    CA  L IHRN+LRYR+E+I E++G++ 
Sbjct: 287 LLNPLRKVLAKDSNGQLLATLRSWCEHDGQSQACADALGIHRNSLRYRMERIAELSGVDP 346

Query: 361 NSLLGLAELYIAYQL 375
            +L G+  LY+  QL
Sbjct: 347 LTLDGMLALYLGVQL 361