Pairwise Alignments

Query, 450 a.a., permease from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., L-idonate, D-gluconate, 5-keto-D-gluconate transporter from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  187 bits (474), Expect = 8e-52
 Identities = 142/459 (30%), Positives = 230/459 (50%), Gaps = 37/459 (8%)

Query: 1   MSLILILLAVIVFIVLATTKFKVHPFLALLLAAFLGAFAYGLPADTIAKTITTGFGGILG 60
           M LI+I   V + +VL    FKV+ F+AL+L A +  FA G+ A  +  +I  G GG LG
Sbjct: 1   MPLIIIAAGVALLLVLMIG-FKVNGFIALVLVAAVVGFAEGMGAQDVLHSIQNGIGGTLG 59

Query: 61  YIGLVIVLGTIIGVILEKSGAAITMADTVIKLLGERFPTLTMSIIGYIVSIPVFCDSGFV 120
            + +++  G ++G ++  +GAA  +A T+I   G++     + I G IV + +F + GFV
Sbjct: 60  GLAMILGFGAMLGRLISDTGAAQRIATTLINTFGKKRVQWALVITGLIVGLAMFFEVGFV 119

Query: 121 ILNSLKESLAKRLATSSVAMSVALATGLYATHTFVPPTPGPIAAA----GNLGLESQLGL 176
           +L  L  ++        + + V +   L  TH F+PP PGP A A     NLG     GL
Sbjct: 120 LLLPLVFTIVASSGLPLLYVGVPMVAALSVTHCFLPPHPGPTAIATIFEANLGTTLLYGL 179

Query: 177 VIAIGLFVAAVAAIAGMLWANRFQAVEADIIDSQESPKKDWQALKASYGQLPSASQAFAP 236
           +I I   +     +AG L++      E      +  P+  +     S  ++PS   +   
Sbjct: 180 IITIPTVI-----VAGPLFSKLLARFE------KAPPEGLFNPHLFSEEEMPSFWNSIFA 228

Query: 237 IFVPILLICFGSIAKFPSFPFGQGMLFEVLGFLGQPLTALLIGLLLAVRLL--KSADKVA 294
             +P++L+   ++ +          +F    F+G P  AL I +++A+  L  ++   V 
Sbjct: 229 AVIPVILMAIAAVCEITLPKTNAVRVF--FEFIGNPAVALFIAIIIAIFTLGRRNGRTVE 286

Query: 295 EFGERISQGITAAAPILLITGAGGAFGAVLKATPLGDYL-----GTTLSALGVGIFMPFI 349
           +  + + + I A A I+ I   GGAF  VL  + +G Y+     GT+LS L     M + 
Sbjct: 287 QVMDIVGESIGAIAMIVFIIAGGGAFKQVLVDSGVGQYISQLMTGTSLSPL----LMCWT 342

Query: 350 VAAALKSAQGSSTVALVTTSALVAPLLGQLGLDSEMGRALTVMAIGAGAMTVSHANDSFF 409
           VAA L+ A GS+TVA +TT+ +V P++     D     AL V+A GAG++  SH ND  F
Sbjct: 343 VAAVLRIALGSATVAAITTAGVVLPIINVTHADP----ALMVLATGAGSVIASHVNDPGF 398

Query: 410 WVVSQFSRMSVGLAYRAQT-MATLVQGGTAMAVVYVLSL 447
           W+   +  +SVG   R  T M TL+   + M ++ VL+L
Sbjct: 399 WLFKGYFNLSVGETLRTWTVMETLI---SVMGLLGVLAL 434