Pairwise Alignments

Query, 450 a.a., permease from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., D-serine permease DsdX from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  214 bits (545), Expect = 4e-60
 Identities = 152/457 (33%), Positives = 237/457 (51%), Gaps = 28/457 (6%)

Query: 3   LILILLAVIVFIVLATTKFKVHPFLALLLAAFLGAFAYGLPADTIAKTITTGFGGILGYI 62
           ++  LL  IV IVL   KFK HPFLALLLA+F      G+    +   I  G GG LG++
Sbjct: 7   VVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGAMMGMGPLEMVTAIENGIGGTLGFL 66

Query: 63  GLVIVLGTIIGVILEKSGAAITMADTVIKLLGERFPTLTMSIIGYIVSIPVFCDSGFVIL 122
             VI LGTI+G ++E SGAA  +  T+ +        + M ++G I  I +F + G V+L
Sbjct: 67  AAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSADVI-MVLVGLICGITLFVEVGVVLL 125

Query: 123 NSLKESLAKRLATSSVAMSVALATGLYATHTFVPPTPGPIAAAGNLGLESQLGLVIAIGL 182
             L  S+AK+  TS + +++ L T L A H  VPP P  +  A  LG  + +G VI  GL
Sbjct: 126 IPLAFSIAKKTHTSLLKLAIPLCTALMAVHCVVPPHPAALFVANKLG--ADIGSVIVYGL 183

Query: 183 FVAAVAAIAG-----MLWANR--FQAVEADIIDSQESPKKDWQALKASYGQLPSASQAFA 235
            V  +A++ G         NR  F+ V  +  D +   +            LPS      
Sbjct: 184 LVGLMASLVGGPLFLKFLGNRLPFKPVPTEFADLEVRAE----------NTLPSLGATLF 233

Query: 236 PIFVPILLICFGSIAKFPSFPFGQGMLFEVLGFLGQPLTALLIGLLLAVRL--LKSADKV 293
            + +PI L+   ++A+        G L+ +L F+G P+TA+ I + +A  +  L+    +
Sbjct: 234 TVLLPIGLMLVKTVAELNMAK--DGTLYTLLEFIGNPITAMFIAVFVAYYILGLRQHMGM 291

Query: 294 AEFGERISQGITAAAPILLITGAGGAFGAVLKATPLGDYLGTTLSALGV-GIFMPFIVAA 352
                    G  A A ILLI GAGGAF A+LK++ L D L   LS + +  I + ++VA 
Sbjct: 292 GTLLTHTENGFGAIANILLIIGAGGAFNAILKSSGLADTLAVILSNMHMHPILLAWLVAL 351

Query: 353 ALKSAQGSSTVALVTTSALVAPLLGQLGLDSEMGRALTVMAIGAGAMTVSHANDSFFWVV 412
            L +A GS+TVA++  +A+VAP+   L L  ++   +  +AIG+GA+  +   DS FW+V
Sbjct: 352 ILHAAVGSATVAMMGATAIVAPM---LPLYPDVSPEIIAIAIGSGAIGCTIVTDSLFWLV 408

Query: 413 SQFSRMSVGLAYRAQTMATLVQGGTAMAVVYVLSLVL 449
            Q+   ++   ++  T AT +    A+A  ++LS ++
Sbjct: 409 KQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII 445