Pairwise Alignments

Query, 450 a.a., permease from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., D-serine transporter DsdX from Escherichia coli ECOR38

 Score =  214 bits (544), Expect = 6e-60
 Identities = 154/457 (33%), Positives = 240/457 (52%), Gaps = 28/457 (6%)

Query: 3   LILILLAVIVFIVLATTKFKVHPFLALLLAAFLGAFAYGLPADTIAKTITTGFGGILGYI 62
           ++  LL  IV IVLA  KFK HPFLALLLA+F      G+    +   I +G GG LG++
Sbjct: 7   VVSTLLISIVLIVLAIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNAIESGIGGTLGFL 66

Query: 63  GLVIVLGTIIGVILEKSGAAITMADTVIKLLGERFPTLTMSIIGYIVSIPVFCDSGFVIL 122
             VI LGTI+G ++E SGAA  +  T+ +        + M ++G I  I +F + G V+L
Sbjct: 67  AAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSADVI-MVLVGLICGITLFVEVGVVLL 125

Query: 123 NSLKESLAKRLATSSVAMSVALATGLYATHTFVPPTPGPIAAAGNLGLESQLGLVIAIGL 182
             L  S+AK+  TS + +++ L T L A H  VPP P  +  A  LG  + +G VI  GL
Sbjct: 126 IPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYVANKLG--ADIGSVIVYGL 183

Query: 183 FVAAVAA-IAGMLWAN------RFQAVEADIIDSQESPKKDWQALKASYGQLPSASQAFA 235
            V  +A+ I G L+         F+ V  +  D +   +K           LPS      
Sbjct: 184 LVGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLKVRDEK----------ILPSLGATLF 233

Query: 236 PIFVPILLICFGSIAKFPSFPFGQGMLFEVLGFLGQPLTALLIGLLLAVRLL--KSADKV 293
            I +PI L+   +IA+       +  L+ +L F+G P+TA+ I + +A  +L  +    +
Sbjct: 234 TILLPIALMLVKTIAELNM--ARESGLYTLLEFIGNPITAMFIAVFVAYYVLGIRQHMSM 291

Query: 294 AEFGERISQGITAAAPILLITGAGGAFGAVLKATPLGDYLGTTLSALGV-GIFMPFIVAA 352
                    G  + A ILLI GAGGAF A+LK++ L D L   LS + +  I + ++VA 
Sbjct: 292 GTMLTHTENGFGSIANILLIIGAGGAFNAILKSSSLADTLAVILSNMHMHPILLAWLVAL 351

Query: 353 ALKSAQGSSTVALVTTSALVAPLLGQLGLDSEMGRALTVMAIGAGAMTVSHANDSFFWVV 412
            L +A GS+TVA++  +A+VAP+   L L  ++   +  +AIG+GA+  +   DS FW+V
Sbjct: 352 ILHAAVGSATVAMMGATAIVAPM---LPLYPDISPEIIAIAIGSGAIGCTIVTDSLFWLV 408

Query: 413 SQFSRMSVGLAYRAQTMATLVQGGTAMAVVYVLSLVL 449
            Q+   ++   ++  T AT +    A+A  ++LS ++
Sbjct: 409 KQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII 445