Pairwise Alignments

Query, 450 a.a., permease from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., 5-keto-D-gluconate transporter from Alteromonas macleodii MIT1002

 Score =  214 bits (545), Expect = 4e-60
 Identities = 147/455 (32%), Positives = 237/455 (52%), Gaps = 25/455 (5%)

Query: 2   SLILILLAVIVFIVLATTKFKVHPFLALLLAAFLGAFAYGLPADTIAKTITTGFGGILGY 61
           SL+ + +  IV +       KVH F+A+L+AA       G+ A  +  ++ +G G  LG+
Sbjct: 6   SLLFVAICSIVLLTYLVVVRKVHAFIAILVAAAFVGLGTGMQAADVLASMQSGMGNTLGF 65

Query: 62  IGLVIVLGTIIGVILEKSGAAITMADTVIKLLGERFPTLTMSIIGYIVSIPVFCDSGFVI 121
           +  ++ LG + G  LE+SG    ++ T+    G++     + + G++V+IPVF + G +I
Sbjct: 66  VATIVGLGAMFGQFLEESGGIDRLSQTINNKFGDKNSQWAVVLTGFLVAIPVFFEVGLII 125

Query: 122 LNSLKESLAKRLATSSVAMSVALATGLYATHTFVPPTPGPIAAAGNLGLESQLGLVIAIG 181
           L  L  SLAK+   S +   + L  GL  TH F+PPTPGP+A A  LG  + +GLVI  G
Sbjct: 126 LMPLIYSLAKKSGKSLIYYGIPLTAGLAVTHAFIPPTPGPVAVASILG--ADIGLVILFG 183

Query: 182 LFVA-AVAAIAGMLWANRFQAVEADIIDSQESPKKDWQALKASYGQLPSASQAFAPIFVP 240
             V    A +AG ++A  F A    +      P    +A      +LPS     A +  P
Sbjct: 184 FIVGIPCACLAGPIYAT-FLAKRLHV----PVPNHIIEASHKKPMELPSFGSVAALLTFP 238

Query: 241 ILLICFGSIAKFPSFPFGQGMLFEVLGFLGQPLTALLIGLLLAVRLL--KSADKVAEFGE 298
           ++ I  G++AK   F   +G+L E L F+G P  AL I  +   ++L  K      +   
Sbjct: 239 LVAILVGTLAK---FTLSEGVLKEALLFIGHPFIALTIATIACFKVLGKKQGLSSEQIRN 295

Query: 299 RISQGITAAAPILLITGAGGAFGAVLKATPLGDYLG-----TTLSALGVGIFMPFIVAAA 353
             S+G+   A ++L+TGAGG F  VL  +  G         + L  L  G    F++A +
Sbjct: 296 IASRGLEPVALVILVTGAGGMFKQVLIDSGAGQAFADVVALSPLPPLAAG----FLIAIS 351

Query: 354 LKSAQGSSTVALVTTSALVAPLLGQLGLDSEMGRALTVMAIGAGAMTVSHANDSFFWVVS 413
           ++  QGS+TVA++T + L+ P++ +L     +  AL  +AI AGA  +SH ND+ FW+V+
Sbjct: 352 VRIIQGSATVAMLTAAGLMGPVVQELAFSPSV-LALMTIAIAAGATAMSHVNDTGFWIVN 410

Query: 414 QFSRMSVGLAYRAQT-MATLVQGGTAMAVVYVLSL 447
           ++  +SV   + + T MATL+ G   + +V +L L
Sbjct: 411 RYFDISVKDTFVSWTCMATLI-GFIGLFLVLMLGL 444