Pairwise Alignments

Query, 278 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., hypothetical protein from Pseudomonas sp. RS175

 Score =  101 bits (251), Expect = 2e-26
 Identities = 70/281 (24%), Positives = 123/281 (43%), Gaps = 7/281 (2%)

Query: 1   MLKWLR-----VLLLCTFLVGCATKLVYHNLDWFVIDYAEDFVDLNTQQKTLIEQTMPSL 55
           M +WL      + LL T        L Y NLD  +     D++++N +QK    + +   
Sbjct: 1   MSRWLTRTAMFIALLLTLTACSRIGLAYRNLDLIIPWTLNDYLEINGEQKDWFNERLKEH 60

Query: 56  QSWHRAQELPDYLAMMDELSALSLPD-VTVEQVAQFQEKMRFYYQRLVIKLLPDVSRLAA 114
            SWH   +LP YL  +D L  +   D VT E + Q   + +         + P    L  
Sbjct: 61  LSWHCTTQLPGYLDWLDRLKTMVQTDQVTDEALQQRTREAKAAIAETARAITPSAIELLQ 120

Query: 115 TLSEEQTEQFMQAFIKRHDKFAKKFIKMDESELRDFYQERITDRLEDWLGPLNKSQQELV 174
            L+++Q      AFIK   K  ++++K    +      ER+  RL DWLGPLN +Q++ V
Sbjct: 121 GLNDDQVADMDAAFIKDQRKRQQQYLKPTLQQQIQERSERMEKRLNDWLGPLNIAQRQRV 180

Query: 175 KVWSDNIQPTANDWIGFQTTMREQVRTLLQQRTQPEAFQTQLESLLLNPEQHYGMILKAK 234
             WS  +      WI  +   + Q    + QR  P+ F  ++E LL++ E  +    +  
Sbjct: 181 VAWSTALGDQNQQWIANRAHWQNQFSAAVAQRHSPD-FAKRIEQLLVDRESLWTPAYREA 239

Query: 235 LSYNRELGQRYVVQILQNSSDKQQQHWRDELADWRGRVSDL 275
            +      +  ++ ++ +S+  Q++    ++   +   SDL
Sbjct: 240 YNKTEAQARSLLIDLMADSTPPQRERLLKKIDGVKKDFSDL 280