Pairwise Alignments

Query, 278 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., hypothetical protein from Pseudomonas fluorescens SBW25

 Score = 87.0 bits (214), Expect = 4e-22
 Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 4/260 (1%)

Query: 2   LKWLRVLL-LCTFLVGC-ATKLVYHNLDWFVIDYAEDFVDLNTQQKTLIEQTMPSLQSWH 59
           LK L VLL L   L GC    L Y NLD  +     D++D+N  QK+     +    +WH
Sbjct: 5   LKLLVVLLTLSLVLAGCNRVGLAYRNLDVIIPWTLNDYLDMNAGQKSWFNDKLKEHLAWH 64

Query: 60  RAQELPDYLAMMDELSALSLPDVTVEQVAQFQE-KMRFYYQRLVIKLLPDVSRLAATLSE 118
              +LP YL  +D L  +   +   +   Q +  + +     +  ++ P    L   L +
Sbjct: 65  CTTQLPGYLDWLDRLQQMVDDNQVTDAALQTRTVEAKQAIAEVAREVTPSAIELLQGLDD 124

Query: 119 EQTEQFMQAFIKRHDKFAKKFIKMDESELRDFYQERITDRLEDWLGPLNKSQQELVKVWS 178
           +Q ++   A  K   K   +++K   ++      ER+  RL+ W+GPL+ SQ+  V  WS
Sbjct: 125 QQVKEMNDALAKDLRKRQDEYLKPPLAKQIQERAERMNKRLDAWMGPLSDSQKNRVTAWS 184

Query: 179 DNIQPTANDWIGFQTTMREQVRTLLQQRTQPEAFQTQLESLLLNPEQHYGMILKAKLSYN 238
            ++      WIG +   + Q    ++QR Q   F  +++ LL++ E  +    +   +  
Sbjct: 185 ISLGEQNQQWIGNRAHWQAQFIDAVKQR-QSADFPQKMQQLLVDRESLWTPEYRVAYAET 243

Query: 239 RELGQRYVVQILQNSSDKQQ 258
               +  +V ++  SS +Q+
Sbjct: 244 EAAARSLIVDLMAQSSVQQR 263