Pairwise Alignments

Query, 312 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  159 bits (403), Expect = 6e-44
 Identities = 97/291 (33%), Positives = 157/291 (53%), Gaps = 6/291 (2%)

Query: 12  DLATFIVVVNEGSFTAAASKLGVTPSALSKLITRLEQALSVKLFERTTRKLIITQAGQKV 71
           D+  F  V+  GSFTAAA +LG++   +S+ + +LE  L V+L  R+TR+L +T  GQ  
Sbjct: 6   DMRLFCQVMESGSFTAAAEQLGLSKQFVSRRLIQLEDRLGVRLLNRSTRRLDVTPLGQSY 65

Query: 72  YDQSLLMVNAAQQAIEISSSEHAEPAGALTVAAPEAFLNSVLQPFVVPFLAQYPHIQLKL 131
           Y+ +L +++  +Q  +  + +++EP G + ++AP +F  + L   +  FL +YP + +++
Sbjct: 66  YESALRLLSEVEQVEQGIAGQNSEPRGTIRLSAPLSFAMAHLGCLLPLFLRRYPQVAVEV 125

Query: 132 RAADGDIDLFKHNIDVAFRLTDKPDENLVLRELCKTNLVLCASPEYLAQRGTPIHPTDLA 191
             +D  +DL     D+  R+    D  L+ R +     V CASP+YLA RGTP  P DLA
Sbjct: 126 DLSDRPVDLIGEGYDLVLRIGTLEDSTLIARRIASIPRVYCASPDYLALRGTPHKPDDLA 185

Query: 192 EHDCLYLAETDKDHIWTFAKGRETHTVAVSGRYAVNQSQLRLTGVKNHLGIGIFHDFVVQ 251
           EHDCL      +   W F KG+    + VSGR  VN   L        LG+     F+V 
Sbjct: 186 EHDCLPYGH-GRQVQWRF-KGK-VQALNVSGRMRVNNGDLLRDTAIAGLGVTYLPTFIVG 242

Query: 252 DALAAGKVVQVLQEWNIKSNYHGAIAMQYAQTKYMPARLRVFIDFVLEHLS 302
           DAL  G++V VL E+  ++    A+   Y Q +     ++  ++F+ E L+
Sbjct: 243 DALKDGRLVTVLDEFAPEALTLSAV---YPQHRQGSRPVQALVEFLRERLA 290