Pairwise Alignments

Query, 312 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  169 bits (429), Expect = 6e-47
 Identities = 101/289 (34%), Positives = 148/289 (51%), Gaps = 3/289 (1%)

Query: 12  DLATFIVVVNEGSFTAAASKLGVTPSALSKLITRLEQALSVKLFERTTRKLIITQAGQKV 71
           ++A F +V  EGS +AAA  LG+TPSA+S++I R EQ L  +L  RTTR +  T  G+ V
Sbjct: 9   EMAVFAMVAQEGSLSAAARALGLTPSAVSRVIARTEQRLGSRLLIRTTRAIAFTAEGE-V 67

Query: 72  YDQSLLMVNAAQQAIEISSSEHAEPAGALTVAAPEAFLNSVLQPFVVPFLAQYPHIQLKL 131
           Y +    + A    +E + ++   P G L V+A        + P V  F A+YP+I + L
Sbjct: 68  YLRGARRILADMAEVEDAIADQGAPKGRLRVSAALGHGRMAIVPLVAAFSARYPNIVVDL 127

Query: 132 RAADGDIDLFKHNIDVAFRLTDKPDENLVLRELCKTNLVLCASPEYLAQRGTPIHPTDLA 191
              D  +D+     DVA R  D PD  L  R +  T  V+ ASP+YL Q GTP+ P DL 
Sbjct: 128 TLGDEIVDILGGQADVAIRFGDLPDSPLTARRIGDTGQVVVASPDYLQQHGTPLEPNDLL 187

Query: 192 EHDCLYLAETDKDHIWTFAKGRETHTVAVSGRYAVNQSQLRLTGVKNHLGIGIFHDFVVQ 251
            H+CL          W FA+  +T ++ ++G    +  +      +   GI     F V 
Sbjct: 188 RHNCLRFNFRRAQPDWPFAQNGKTFSLKINGNIECSSGEALAQLARLGAGIARIGTFTVA 247

Query: 252 DALAAGKVVQVLQEWNIKSNYHGAIAMQYAQTKYMPARLRVFIDFVLEH 300
           + L  G +V +L+ WN        I + +     MPAR+RVF+DF+LEH
Sbjct: 248 EDLQRGHLVPLLESWN--PGDREPIHVVFVGGASMPARIRVFVDFLLEH 294