Pairwise Alignments

Query, 312 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  160 bits (405), Expect = 4e-44
 Identities = 96/288 (33%), Positives = 148/288 (51%), Gaps = 3/288 (1%)

Query: 18  VVVNEGSFTAAASKLGVTPSALSKLITRLEQALSVKLFERTTRKLIITQAGQKVYDQSLL 77
           V+  +G++TAAA++LGV+ SA+S+ I+ LE+A   +L  RTTR + +T AG  +  +   
Sbjct: 18  VLEEQGTYTAAAARLGVSKSAVSQRISDLEKATGTRLVTRTTRSVRLTDAGLSLTREVRS 77

Query: 78  MVNAAQQAIEISSSEHAEPAGALTVAAPEAFLNSVLQPFVVPFLAQYPHIQLKLRAADGD 137
                 ++         E  G L + AP AF    L P +  FL QYP ++L+L  +D  
Sbjct: 78  AYEQIARSFSSVRDSVGEIRGLLRLTAPVAFARQQLVPHLSEFLQQYPQVRLQLDVSDAL 137

Query: 138 IDLFKHNIDVAFRLTDKPDENLVLRELCKTNLVLCASPEYLAQRGTPIHPTDLAEHDCLY 197
             L     D+A R   +  E  V  +LC T  VL AS +YL + G P  P DL+ H+CL+
Sbjct: 138 SSLAAEGYDLAVRHGFQVPETHVAWKLCDTGSVLVASQDYLQRHGEPREPGDLSAHNCLF 197

Query: 198 LAETDKDHIWTFAKGR---ETHTVAVSGRYAVNQSQLRLTGVKNHLGIGIFHDFVVQDAL 254
                    WTF +G    E  TV ++G +A N S+       NHLGI +  DF    AL
Sbjct: 198 YPRGTDQPAWTFERGTKNVERLTVPIAGSFATNNSEALRDSALNHLGIALLPDFSAHAAL 257

Query: 255 AAGKVVQVLQEWNIKSNYHGAIAMQYAQTKYMPARLRVFIDFVLEHLS 302
           ++GK+VQVL+ W +K  +   I +    + ++P  +   + ++   LS
Sbjct: 258 SSGKLVQVLKGWTLKGAFADEIYLIRPYSPHVPKAVSALVSYLKGKLS 305