Pairwise Alignments

Query, 312 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  160 bits (404), Expect = 5e-44
 Identities = 99/298 (33%), Positives = 150/298 (50%), Gaps = 10/298 (3%)

Query: 9   LLPDLATFIVVVNEGSFTAAASKLGVTPSALSKLITRLEQALSVKLFERTTRKLIITQAG 68
           L   ++ ++ VV  GS TAAA   G++ + +   +  LEQ L V L +RTTRK  +T+ G
Sbjct: 3   LFQAMSVYVKVVETGSMTAAAQACGMSTTMVGNHLRALEQRLGVSLLKRTTRKQSLTEFG 62

Query: 69  QKVYDQSLLMVNAAQQAIEISSSEHAE-PAGALTVAAPEAFLNSVLQPFVVPFLAQYPHI 127
            + Y + L ++     + +++   H++ P G L + AP  F    L P +  F  +YP I
Sbjct: 63  GQYYQRCLEVLGLVADSEQLAEQAHSDVPKGTLRITAPPVFGTERLTPALSEFSRRYPLI 122

Query: 128 QLKLRAADGDIDLFKHNIDVAFRLTDKPDENLVLRELCKTNLVLCASPEYLAQRGTPIHP 187
            L +  ++  +DL     D A RL +    +L+ R +    L LCASP+YLA+RGTP  P
Sbjct: 123 NLYVVLSNERMDLVDSGFDAAIRLGELETSSLIARPMQAYTLTLCASPDYLARRGTPQTP 182

Query: 188 TDLAEHDCLYLAE------TDKDHIWTFAKGRETHTVAVSGRYAVNQSQLRLTGVKNHLG 241
            DL  HDCL  A        D D +W          V VSG   +N SQ       N +G
Sbjct: 183 DDLQHHDCLAFAYPASDNWRDADKLWRMTGESGEVEVPVSGSLTINSSQGLRQAAVNGMG 242

Query: 242 IGIFHDFVVQDALAAGKVVQVLQEWNIKSNYHGAIAMQYAQTKYMPARLRVFIDFVLE 299
           I +  D +VQ  L +GK+V +L  + + S     + + Y Q +Y   +LR F+DF +E
Sbjct: 243 IIMLADALVQPDLESGKLVALLTTYRLPSR---PMHLLYGQDRYRLPKLRAFVDFAME 297