Pairwise Alignments

Query, 312 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  157 bits (397), Expect = 3e-43
 Identities = 93/291 (31%), Positives = 149/291 (51%), Gaps = 4/291 (1%)

Query: 12  DLATFIVVVNEGSFTAAASKLGVTPSALSKLITRLEQALSVKLFERTTRKLIITQAGQKV 71
           D+  F  V+  GSFTAAA +LG++  ++S+ + +LE+ L V+L  R+TR+L  T  GQ  
Sbjct: 6   DMRIFAQVMEAGSFTAAADRLGMSKQSVSRRLMQLEERLGVRLLNRSTRRLDATPLGQHY 65

Query: 72  YDQSLLMVNAAQQAIEISSSEHAEPAGALTVAAPEAFLNSVLQPFVVPFLAQYPHIQLKL 131
           Y  +L ++   QQ     S +     G L ++AP +F  + L   +  FL  +P + +++
Sbjct: 66  YQSALRLLGEVQQVEHDISGQAQVLRGTLRLSAPLSFAMAHLGCLLTEFLQLHPQVDVEV 125

Query: 132 RAADGDIDLFKHNIDVAFRLTDKPDENLVLRELCKTNLVLCASPEYLAQRGTPIHPTDLA 191
             +D  +DL     D+A R+    D +L+ R +     V CASP YL  RG P  P +LA
Sbjct: 126 DLSDRAVDLIGEGYDLALRIGALEDSSLIARRIASVERVYCASPAYLQARGVPGKPDELA 185

Query: 192 EHDCLYLAETDKDHIWTFAKGRETHTVAVSGRYAVNQSQLRLTGVKNHLGIGIFHDFVVQ 251
            HDCL    + +   W F KG +T  + V+GR   N  +L        +G+     F+V 
Sbjct: 186 AHDCLPYGHS-RQVQWQFHKGGKTQAIQVTGRMRANNGELLRGAAIAGMGVTYLPTFIVG 244

Query: 252 DALAAGKVVQVLQEWNIKSNYHGAIAMQYAQTKYMPARLRVFIDFVLEHLS 302
            ALA G++V VL EW   +    A+   Y Q + +   ++ F+ F+   L+
Sbjct: 245 QALAEGQLVTVLDEWRPPALQLSAV---YPQHRQVARPVQGFVSFLRARLA 292