Pairwise Alignments

Query, 312 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., DNA-binding transcriptional activator TtdR from Escherichia coli ECRC62

 Score =  157 bits (397), Expect = 3e-43
 Identities = 92/290 (31%), Positives = 150/290 (51%), Gaps = 5/290 (1%)

Query: 9   LLPDLATFIVVVNEGSFTAAASKLGVTPSALSKLITRLEQALSVKLFERTTRKLIITQAG 68
           L  DL   + +V+ GSF+AAA+ LG TP+ ++K I  LE  L+  L  R+ R + +T++G
Sbjct: 7   LAKDLQVLVEIVHSGSFSAAAATLGQTPAFVTKRIQILENTLATTLLNRSARGVALTESG 66

Query: 69  QKVYDQSLLMVNAAQQAIEISSSEHAEPAGALTVAAPEAFLNSVLQPFVVPFLAQYPHIQ 128
           Q+ Y+ +L ++   Q+ ++  +     P G + +     F  S + P +   +  YP +Q
Sbjct: 67  QRCYEHALEILTQYQRLVDDVTQIKTRPEGMIRIGCSFGFGRSHIAPAITELMRNYPELQ 126

Query: 129 LKLRAADGDIDLFKHNIDVAFRLTDKPDENLVLRELCKTNLVLCASPEYLAQRGTPIHPT 188
           +     D  IDL + NID+  R+ D+  +  +   L K   +LCA+PEYL +   P    
Sbjct: 127 VHFELFDRQIDLVQDNIDLDIRINDEIPDYYIAHLLTKNKRILCAAPEYLQKYPQPQSLQ 186

Query: 189 DLAEHDCLYLAETDKDH-IWTFAKGRETHTVAVSGRYAVNQSQLRLTGVKNHLGIGIFHD 247
           +L+ HDCL   E D  H IW    G+E  +V VSG  + N  ++ L       GI +  +
Sbjct: 187 ELSRHDCLVTKERDMTHGIWELGNGQEKKSVKVSGHLSSNSGEIVLQWALEGKGIMLRSE 246

Query: 248 FVVQDALAAGKVVQVLQEWNIKSNYHGAIAMQYAQTKYMPARLRVFIDFV 297
           + V   L +GK+VQVL E+   +N    I   Y +  Y   +LRV ++F+
Sbjct: 247 WDVLPFLESGKLVQVLPEYAQSAN----IWAVYREPLYRSMKLRVCVEFL 292