Pairwise Alignments

Query, 314 a.a., DNA-binding transcriptional regulator DsdC from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  124 bits (312), Expect = 2e-33
 Identities = 84/294 (28%), Positives = 144/294 (48%), Gaps = 14/294 (4%)

Query: 19  LSKLHTFEVAARHNSFSLAADELSLTPSAISHRINKLEEEIGIKLFERTHRKVVLTEEGQ 78
           L+ L  FE +ARH SF+ AA EL +T +A+SH++  LE ++ + LF+R  R ++LT EG+
Sbjct: 8   LNALRAFEASARHLSFTRAAIELCVTQAAVSHQVKSLEAQLNVTLFKRLPRGLMLTSEGE 67

Query: 79  RIYHSLQKTLNNLNQEITDIKNGETSGLLTIYSRPSFAQCWLVPRIHAFKELYPSIDLKL 138
            +   ++ + + + Q ++  + G    +LT+ +  +FA  WL+PR+ AF+  YP IDL+L
Sbjct: 68  TLLPVVRDSFDRIAQTLSQFEGGHYREVLTVGAVGTFAVGWLLPRLPAFQTRYPFIDLRL 127

Query: 139 LTGNENISFQGSGIDVAIYFDDHMPDKLSCKEIFSETIIPVCTPEYAQKYSLTSSMDNLY 198
            T N  +     G+D AI F           E+    +  +C P+ A++     + +++ 
Sbjct: 128 STHNNRVDVAAEGLDYAIRFGAGAWHGTEACELLEAPLTVLCVPQLAEQ---LHAPEDVL 184

Query: 199 NTTLLHDNQAWNYNSDADEWKTWANANQLENLENISR-IGFDRSDLAVIAAINNAGIAMG 257
             TLL   +       ADEW  W  A  L     + R I FD S   + AA+   G+A+ 
Sbjct: 185 KHTLLRSYR-------ADEWSLWFQAAGLPADTLVPRSIIFDSSLAMMEAALQGIGVALA 237

Query: 258 RFSLVKSRLSSGELMTPYPNTEVICKQRYYVATLPNKHNQKVKL-FIDWLESQV 310
              +   +L +  +  P+     I    Y++  L ++      L F  W+   V
Sbjct: 238 PAMMFSRQLENDVIRQPF--DVGISTGSYWLTRLQSRAETPAMLAFKGWMRESV 289