Pairwise Alignments

Query, 314 a.a., DNA-binding transcriptional regulator DsdC from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  142 bits (359), Expect = 8e-39
 Identities = 88/296 (29%), Positives = 145/296 (48%), Gaps = 7/296 (2%)

Query: 19  LSKLHTFEVAARHNSFSLAADELSLTPSAISHRINKLEEEIGIKLFERTHRKVVLTEEGQ 78
           L  L TFE AAR  SF+LAA EL LT SA+S +I +LE  +G+ LFER HR + LTE G 
Sbjct: 16  LELLRTFEAAARRLSFTLAAGELHLTQSAVSRQIQQLEASLGVLLFERRHRALSLTEAGG 75

Query: 79  RIYHSLQKTLNNLNQEITDIKNGETSGLLTIYSRPSFAQCWLVPRIHAFKELYPSIDLKL 138
            +  ++  +L  L      ++       + I + P FA  WL+PR+  F   +P +D+++
Sbjct: 76  VMQRAVTDSLERLRDATARVRASSAPRQVAITTTPGFASLWLIPRLARFTGTHPQVDVRV 135

Query: 139 LTGNENISFQGSGIDVAIYFDDHMPDKLSCKEIFSETIIPVCTPEYAQKYSLTSSMDNLY 198
               + +  + S ID+A+ F      +     +F E+++P+C P  A+     S +  L 
Sbjct: 136 SATLDVLDLESSRIDIAVRFAPF--SRGVGPALFEESVVPLCAPRLAEALHAPSDLSGL- 192

Query: 199 NTTLLHDNQAWNYNSDADEWKTWANANQLENLENISRIGFDRSDLAVIAAINNAGIAMGR 258
             TLL  + A    +   +W+ W     L +L   S + F     AV AA+   G+ +GR
Sbjct: 193 --TLLTVDYADPSETATTDWEPWLRVMGLADLRMKSTLRFTHYADAVAAAVAGQGVVIGR 250

Query: 259 FSLVKSRLSSGELMTPYPNTEVICKQRYYVATLPN-KHNQKVKLFIDWLESQVKKA 313
             L++  +  G L+ P     V+ ++ Y++        N+  + F  WL  + + A
Sbjct: 251 MPLLRELVRDGRLVAPL-GEGVVSRRAYFIEMSKRAAGNRDAQDFAQWLRDEAEAA 305