Pairwise Alignments

Query, 314 a.a., DNA-binding transcriptional regulator DsdC from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., Transcriptional regulator AmpR, LysR family from Sphingobium sp. HT1-2

 Score =  116 bits (290), Expect = 7e-31
 Identities = 80/260 (30%), Positives = 124/260 (47%), Gaps = 11/260 (4%)

Query: 19  LSKLHTFEVAARHNSFSLAADELSLTPSAISHRINKLEEEIGIKLFERTHRKVVLTEEGQ 78
           L+ L  FE AARH SF+ A  EL ++  A+S ++ +LE  IG  LF R  R + LT+EG 
Sbjct: 8   LNALRAFEAAARHLSFTRAGLELCVSQGAVSQQVAQLEARIGAPLFRRLPRGLALTDEGL 67

Query: 79  RIYHSLQKTLNNLNQEITDIKNGETSGLLTIYSRPSFAQCWLVPRIHAFKELYPSIDLKL 138
            +   L    + +   +  I+ G    +LT+    +FA  WL+PR+  F    P +DL+L
Sbjct: 68  ALLPVLADAFDRVGGTLERIEGGRLHEVLTLGVVGTFAGGWLLPRLADFARACPHVDLRL 127

Query: 139 LTGNENISFQGSGIDVAIYFDDHMPDKLSCKEIFSETIIPVCTPEYAQKYSLTSSMDNLY 198
           +T N  +   G G+D+AI F +        + I    + P+CTP  A + +  ++   L 
Sbjct: 128 MTNNNRVDLAGEGLDLAIRFGEGAWHGTHAQPILRAPLAPLCTPALAVRLADPAA---LA 184

Query: 199 NTTLLHDNQAWNYNSDADEWKTWANANQLENLENISRIGFDRSDLAVIAAINNAGIAMGR 258
              LL   +       ADEW  W  A        +    FD S L V AA    G+A+  
Sbjct: 185 REPLLRSYR-------ADEWPRWFAAAGAP-CPPLRGPMFDTSLLMVEAARAGLGVALAP 236

Query: 259 FSLVKSRLSSGELMTPYPNT 278
            ++  + L +G L+ P P +
Sbjct: 237 VAMFAADLQAGRLVQPSPES 256