Pairwise Alignments

Query, 314 a.a., DNA-binding transcriptional regulator DsdC from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., DNA-binding transcriptional regulator DsdC from Pseudomonas sp. SVBP6

 Score =  217 bits (553), Expect = 3e-61
 Identities = 117/295 (39%), Positives = 172/295 (58%), Gaps = 2/295 (0%)

Query: 13  RINSFQLSKLHTFEVAARHNSFSLAADELSLTPSAISHRINKLEEEIGIKLFERTHRKVV 72
           R+N  Q + LHTF   ARH SFS AA EL LT SA+SHRI +LE+ + ++LFER  R++ 
Sbjct: 11  RLNGAQFANLHTFLAVARHLSFSQAAQELCLTASAVSHRIARLEQALALRLFERLTRRIR 70

Query: 73  LTEEGQRIYHSLQKTLNNLNQEITDIKNGETSGLLTIYSRPSFAQCWLVPRIHAFKELYP 132
           LT EG+R+Y  LQ     L + +  +   + SG L++Y RPS AQ WLVPR+  F++ YP
Sbjct: 71  LTAEGERLYQVLQGFEAQLQEALQPLTT-QVSGALSLYVRPSVAQHWLVPRLADFQQRYP 129

Query: 133 SIDLKLLTGNENISFQGSGIDVAIYFDDHMPDKLSCKEIFSETIIPVCTPEYAQKYSLTS 192
            + L + TGN+ + F+   +D+A+ +       L  + +  E I PVC+P+YA+++ L  
Sbjct: 130 QLSLDIRTGNDPVDFRTRPVDLALLYGHGEFPGLVSRLLMDERIAPVCSPQYAERHGLIG 189

Query: 193 SMDNLYNTTLLHDNQAWNYNSDADEWKTWANANQLENLENISRIGFDRSDLAVIAAINNA 252
             + L   TLLHD  AW + +   EW+ WA    L+     S + FDRSDL   AA ++A
Sbjct: 190 HPERLAQCTLLHDALAWEHAAFDAEWQRWAREQNLQQHLPASHLTFDRSDLCSAAARHHA 249

Query: 253 GIAMGRFSLVKSRLSSGELMTPYPNTEVICKQRYYVATLPNKH-NQKVKLFIDWL 306
           G+AMGR  LV+  L  G L+ P         Q YY+   P +   Q+V++ ++WL
Sbjct: 250 GVAMGRQRLVQPLLDQGALILPLGGFSQAAGQGYYLVHPPREPLAQRVRVMVEWL 304