Pairwise Alignments

Query, 314 a.a., DNA-binding transcriptional regulator DsdC from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., LysR substrate-binding domain-containing protein from Pectobacterium carotovorum WPP14

 Score =  131 bits (329), Expect = 2e-35
 Identities = 86/293 (29%), Positives = 141/293 (48%), Gaps = 16/293 (5%)

Query: 19  LSKLHTFEVAARHNSFSLAADELSLTPSAISHRINKLEEEIGIKLFERTHRKVVLTEEGQ 78
           L+    FE AA+  SF  AA+ L +T  A+S +I  LEE +G++LFER +R + L   G+
Sbjct: 6   LASFRFFEAAAQTGSFVKAAESLHVTHGAVSRQIRLLEEALGVELFERRNRAIFLNAAGR 65

Query: 79  RIYHSLQKTLNNLNQEITDIKNGETSGLLTIYSRPSFAQCWLVPRIHAFKELYPSIDLKL 138
            ++   Q     L   +  ++      +LT+   P+ A  WL+PR+ AF + +P I L L
Sbjct: 66  SLHTVTQSVFEQLEGAVYRLQQSAQDDVLTLSCEPTIAMKWLIPRLPAFNQAHPDIKLHL 125

Query: 139 LTGNENISFQGSGIDVAIYFDD-HMPDKLSCKEIFSETIIPVCTPEYAQKYSLTSSMDNL 197
           +     I F  SG+D+A+  DD H   +    ++  E + PV   +  +K SL   M  L
Sbjct: 126 VAAGGPIDFVRSGVDLALRRDDFHWDPQTHAVKVCDEWMGPVSRDKTERKNSL-EGMRLL 184

Query: 198 YNTTLLHDNQAWNYNSDADEWKTWANANQLENLENISRIGFDRSDLAVIAAINNAGIAMG 257
           Y  T                W TW     + +L+  +R  ++   L + AA++  GIAM 
Sbjct: 185 YTGT------------RPKAWATWQRQTHV-SLKGSTRADYEHFYLCIQAAVSGLGIAMA 231

Query: 258 RFSLVKSRLSSGELMTPYPNTEVICKQRYYVATLPNKHNQKVKLFIDWLESQV 310
            F +V+  +++G+L  PY          Y ++ +P + N+K   F  WL  +V
Sbjct: 232 SFLMVQDEIANGQLHAPYGFAR-DGSAYYLLSPIPLEQNEKYVRFHTWLMQEV 283