Pairwise Alignments

Query, 314 a.a., DNA-binding transcriptional regulator DsdC from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., LysR family transcriptional regulator from Serratia liquefaciens MT49

 Score =  133 bits (335), Expect = 5e-36
 Identities = 92/276 (33%), Positives = 141/276 (51%), Gaps = 13/276 (4%)

Query: 5   DNIFAKHSRINSFQLSK--LHTFEVAARHNSFSLAADELSLTPSAISHRINKLEEEIGIK 62
           D+   K+SR  S  LS   L  FE AAR  SF+ AA+ L+LT  A+S  +  LE+E+GI 
Sbjct: 4   DDFGEKNSRKISRPLSLGGLRCFEAAARLESFTQAANSLNLTHGAVSRAVRALEDELGIA 63

Query: 63  LFERTHRKVVLTEEGQRIYHSLQKTLNNLNQEITDIKNGETSGLLTIYSRPSFAQCWLVP 122
           LFER HR+V LT  G+ ++ + Q+    L Q    ++       L +   P+    WL+P
Sbjct: 64  LFERRHRRVYLTAAGRTLFQASQQAFGILEQTAQQLRQQAQDAPLVLSCEPTLLMRWLIP 123

Query: 123 RIHAFKELYPSIDLKLLTGNENISFQGSGIDVAIYFDD-HMPDKLSCKEIFSETIIPVCT 181
           R+ AF+  +P I L+L+ G    SF   GI  A+  +D    DKL  + +F+E + PVC 
Sbjct: 124 RLPAFQLAHPDIHLQLVAGGGPFSFH-DGISAALRRNDFDWGDKLHSQWLFNEQVGPVCK 182

Query: 182 PEYAQKY-SLTSSMDNL-YNTTLLHDNQAWNYNSDADEWKTWANANQLENLENISRIGFD 239
           PE   ++ +L +    L  +  LLH        +  D W+ WA   Q  +LE      FD
Sbjct: 183 PEMLPRFIALHAGQPQLSRDAVLLHS------ATRPDAWRHWAQ-QQSVSLEGCPEQRFD 235

Query: 240 RSDLAVIAAINNAGIAMGRFSLVKSRLSSGELMTPY 275
               ++ AA+   G+A+G +  V+  ++ G L  P+
Sbjct: 236 HFYFSLQAAVAGIGVAIGPWQQVRDDVAGGLLSAPF 271