Pairwise Alignments

Query, 314 a.a., DNA-binding transcriptional regulator DsdC from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

 Score =  127 bits (318), Expect = 4e-34
 Identities = 83/277 (29%), Positives = 139/277 (50%), Gaps = 11/277 (3%)

Query: 19  LSKLHTFEVAARHNSFSLAADELSLTPSAISHRINKLEEEIGIKLFERTHRKVVLTEEGQ 78
           LS L  FE A+R  S + AA EL LT  A+S +I  LEE++G+ LF R  + + LT  G+
Sbjct: 12  LSLLAAFEAASRTGSVTAAARELGLTQGAVSRQILALEEQLGVALFLRERQTIRLTRAGE 71

Query: 79  RIYHSLQKTLNNLNQEITDIKNGETSGLLTIYSRPSFAQCWLVPRIHAFKELYPSIDLKL 138
                +++ L  ++    +++     G L +   PSF   WLVPR+  F   +P I + L
Sbjct: 72  GYAREIREALRRISTASLNLRANPDGGTLNLGVLPSFGTRWLVPRLPDFIARHPGISVNL 131

Query: 139 LTGNENISFQGSGIDVAIYFD-DHMPDKLSCKEIFSETIIPVCTPEYAQKYSLTSSMDNL 197
           LT +    F+   +D AI+F   H P       +  E +IPVC+P + + Y L S  D+L
Sbjct: 132 LTRSSLFDFRTDTVDAAIHFGLPHWPG-TELAFLMHEKVIPVCSPAFKELYGL-SRPDDL 189

Query: 198 YNTTLLHDNQAWNYNSDADEWKTWANANQLENLENISRIGFDRSDLAVIAAINNAGIAMG 257
            +  LLH        +  D W+ W  ++ +   +N+  + FD+      A+    G ++ 
Sbjct: 190 LHVPLLH------MTTRPDAWEQWFRSHDV-RFDNVHGMLFDQFTTIAEASSAGVGASLV 242

Query: 258 RFSLVKSRLSSGELMTPYPNTEVICKQRYYVATLPNK 294
              +++  L SG L++     EV  ++ YY+A +P++
Sbjct: 243 PSFMIEEELRSGRLVSAVAG-EVESEEAYYLACMPDR 278