Pairwise Alignments

Query, 314 a.a., DNA-binding transcriptional regulator DsdC from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

 Score =  146 bits (369), Expect = 5e-40
 Identities = 88/293 (30%), Positives = 150/293 (51%), Gaps = 11/293 (3%)

Query: 19  LSKLHTFEVAARHNSFSLAADELSLTPSAISHRINKLEEEIGIKLFERTHRKVVLTEEGQ 78
           L  L  FE AAR+ S +LA++EL++TP A+S +I +LE  +G++LF R  R + LT EG+
Sbjct: 8   LKGLQAFEAAARYRSVTLASNELNVTPGAVSLQIRELEARLGVQLFFRKPRSIQLTREGE 67

Query: 79  RIYHSLQKTLNNLNQEITDIKNGETSGLLTIYSRPSFAQCWLVPRIHAFKELYPSIDLKL 138
           R Y +L+     + +   ++       +LT+   P+FA  WL+PR+ +F++ +P +D+++
Sbjct: 68  RYYGALRTAFRMMREATAELTARSEITVLTLSCTPTFAVQWLMPRLPSFQQQHPHVDVRI 127

Query: 139 LTGNENISFQGSGIDVAIYFDDHMPDKLSCKEIFSETIIPVCTPEYAQKYSLTSSMDNLY 198
              N  + F    +D+A+       + L       ++ +PVC P+  +KY       +L 
Sbjct: 128 SVTNRLVDFSRDDVDLAVRHGFGRYEGLESIRFIDDSTLPVCAPQLLEKYGPLREAGDLK 187

Query: 199 NTTLLHDNQAWNYNSDADEWKTWANANQLENLENISRIGFDRSDLAVIAAINNAGIAMGR 258
           +  LLHD        + +EW+ W  A     ++      F  S+ A+ AA    GIA+ R
Sbjct: 188 SVPLLHD-------ENRNEWRRWLEAAGASEVDASGGTVFIDSNGALDAAKAGHGIALTR 240

Query: 259 FSLVKSRLSSGELMTPYPNTEVICKQRYYVATLPNK--HNQKVKLFIDWLESQ 309
            SLV   L  G L+ P+  T++     Y++   P +   N  +   IDW+ SQ
Sbjct: 241 RSLVSRELVEGALIAPF-GTDMASTLAYFL-VYPRRMLDNPDLVTLIDWMLSQ 291