Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., cytochrome d ubiquinol oxidase subunit II from Rhodanobacter sp000427505 FW510-R12

 Score =  317 bits (813), Expect = 3e-91
 Identities = 162/375 (43%), Positives = 231/375 (61%), Gaps = 3/375 (0%)

Query: 1   MFEYDTLRLIWWGLIGALLIGFMITDGFDMGVGALLPILGQSESDKRVMINSIAPHWDGN 60
           M +Y  LR+IWW L+G LLIGF I DGFD GV  LL +LG+   +++V++  I P W+GN
Sbjct: 1   MLDYAMLRVIWWALLGTLLIGFAIMDGFDFGVAGLLKVLGRDNEERQVLLEGIEPTWEGN 60

Query: 61  QVWLITAGGALFAAWPLVYATSFSSLYIAMYLILLALWLRPLALEYRAKIDTPSWRKICD 120
           QVW I AGGA FAAWP++YA SFS +Y A+ L+LLAL LRP+   +R KI    W  + D
Sbjct: 61  QVWFILAGGATFAAWPMLYAVSFSGMYFAIALVLLALILRPVGFNFRGKIHDARWASLWD 120

Query: 121 ISISLSGLIPPLLFGVAFGNLMQGLPFSLNALLMVDYHGSFIDLITPFSVLSGGIGVLMA 180
             ++ SGL   LL GVAFGNL  GLPF L+  L + +HG F+DL+ PF++L G I + M 
Sbjct: 121 WVLTGSGLAVMLLAGVAFGNLFLGLPFRLDDDLRMSWHGGFLDLLHPFALLCGLISLAML 180

Query: 181 LVQGSAWLTLKTSDILHKKARLTAQISVLCLFGLFIIGG-FMVHGMNGYLIVSSLDYNAI 239
           L  G+ +   K    +  +A   A+ + L    L+++ G ++  G+ GY IV       +
Sbjct: 181 LAHGACFAAFKADHAIAARAVAIARWTTLVFAALYVLAGLWLAWGVPGYAIVGPAATAGV 240

Query: 240 SNPLNKVVFQQAGAWLTNFERYPWMWFAPMGGLMMAMGVFLSAKWKNDAITFVCASVTNA 299
           SNPL K V    G+W  ++ ++PW W AP+  L  A+GV      +N A  F+ +SV   
Sbjct: 241 SNPLFKQV-AVGGSWFASYLQFPWFWAAPLLALAAAVGVQALVGRRNMA-GFLASSVMVG 298

Query: 300 CIILTAGFAMFPFIMPSSFEPSHSLTLWDATSSERTLNIMTGVAFVMLPIILFYTAFSYR 359
             I +AGFA+FPF++PSS +P  SLT+WDA+SS  TL +M     V+LP+++ YT + YR
Sbjct: 299 GTIASAGFALFPFLLPSSLDPRSSLTVWDASSSRGTLQLMLVATAVLLPVVILYTGWVYR 358

Query: 360 TMFGRLDKQYIERNH 374
            M GR+  + + + H
Sbjct: 359 VMRGRVTLEQVRKAH 373