Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., Cytochrome bd-I ubiquinol oxidase subunit 2 from Xanthobacter sp. DMC5

 Score =  107 bits (267), Expect = 5e-28
 Identities = 87/350 (24%), Positives = 159/350 (45%), Gaps = 42/350 (12%)

Query: 22  FMITDGFDMGVGALLPILGQSESDKRVMINSIAPHWDGNQVWLITAGGALFAAWPLVYAT 81
           +++ DG D+GVG L  +    ++D+ VM+ SI P WDGN+ WL+  G  LFAA+P  Y  
Sbjct: 25  YVLADGLDLGVGILF-LAAPRDADRDVMMASIEPVWDGNETWLVMGGTLLFAAFPAGYYI 83

Query: 82  SFSSLYIAMYLILLALWLRPLALEYRAKIDTPSWRKICDISISLSGLIPPLLFGVAFGNL 141
              + Y+ +  +L AL  R +A  +R  +    +R + D +     L+     G+  G L
Sbjct: 84  LLPAFYLPIMFMLFALIFRGVAFGFR--LQATRFRPVWDAAFFAGSLLATFCQGLILGGL 141

Query: 142 MQGLPFSLNALLMVDYHGSFIDLITPFSVLSG-GIGVLMALVQGSAWLTLKTSDILHKKA 200
           + G+P   N +    + G     ++   ++ G G+    AL+ G+ WL  K         
Sbjct: 142 IDGVPVE-NGM----FAGGAFSFLSVLGIMCGVGLVGGYALI-GAGWLIWKAQGPTQVFG 195

Query: 201 RLTAQISVLCLFGLFIIGGFMVHGMNGYLIVSSLDYNAISNPLNKVVFQQAGAWLTNFER 260
           R  A+ +++    + ++                  ++A S P      + A  W   F  
Sbjct: 196 REIARAALILTSAMMLLVSL---------------WSAWSVP------EVAARW---FAL 231

Query: 261 YPWMWFAPMGGLMMA--MGVFLSAKWKNDAITFVCASVTNACIILTAGFAMFPFIMPSSF 318
              +W AP+  L +A  +G++ +     +A TFV + V  A  +     +M+P+++P   
Sbjct: 232 PNLLWLAPVPLLTLAVIVGIWWAIWNGREAQTFVLSLVLFALGLFGLVVSMWPYVVP--- 288

Query: 319 EPSHSLTLWDATSSERTLNIMTGVAFVMLPIILFYTAFSYRTMFGRLDKQ 368
                +T+WD  S  R+L  +     V++P++L Y A +Y    G++  +
Sbjct: 289 ---RQVTVWDGLSDPRSLAFLGVGVMVIIPVVLAYQAHAYWIFRGKVQHE 335