Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

 Score = 98.2 bits (243), Expect = 3e-25
 Identities = 95/366 (25%), Positives = 150/366 (40%), Gaps = 69/366 (18%)

Query: 14  LIGALLIGFMITDGFDMGVGALLPILGQSESDKRVMINSIAPHWDGNQVWLITAGGALFA 73
           L+G  +  + + DG+D+GVG LLP    ++ D+  MI SI P WD N+ WL+ A G L  
Sbjct: 12  LLGFTVFMYAVLDGYDLGVGILLPRNDVAQRDR--MIASIGPFWDANETWLVLAVGILLI 69

Query: 74  AWPLVYATSFSSLYIAMYLILLALWLRPLALEYRAKIDTPSWRKICDISISLSGLIPPLL 133
           A+P  ++  F+ LY+   L+L+AL +R +A ++RAK      +   D+   +  L+  L 
Sbjct: 70  AFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAKA-DHKDHWDLCFKIGSLLAALT 128

Query: 134 FGVAFGNLMQGLPFSLNALLMVDYHGSFIDLITPFSVLSGGIGVLMALVQGSAWLTLKTS 193
            G   G  + G   +  A                F+VLS        +  G AWL LKT 
Sbjct: 129 QGYMIGRYVVGFESAPEAY--------------AFAVLSALCVAAAYVYIGGAWLVLKTE 174

Query: 194 DILH-KKARLTAQISVLCLFGLFIIGGFMVHGMNGYLIVSSLDYNAISNPLNKVVFQQAG 252
             L  + AR + +   L   G+  +                    ++ NP          
Sbjct: 175 GELQVRAARWSRKAGWLAALGVLSV--------------------SLVNP---------- 204

Query: 253 AWLTNFERYPWMWF------APMGGLMMAMGVFLSAKWK-----NDA---ITFVCASVTN 298
            W+ +     W  F      AP+  ++ A  + +    K     NDA     F    +  
Sbjct: 205 -WVNSAVAERWFSFPEVILLAPVPIIVFATILVVDRYLKRVPTVNDAGVQWPFFGVVLIF 263

Query: 299 ACIILTAGFAMFPFIMPSSFEPSHSLTLWDATSSERTLNIMTGVAFVMLPIILFYTAFSY 358
               L   ++ FP I+P        +T   A SS  TL ++     +++P IL YT F Y
Sbjct: 264 GLSFLGLAYSFFPEIVPG------IMTAQQAASSPETLMVVGIGVVIVMPTILLYTFFVY 317

Query: 359 RTMFGR 364
           R   G+
Sbjct: 318 RIFKGK 323