Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) from Sphingobium sp. HT1-2

 Score =  337 bits (863), Expect = 4e-97
 Identities = 170/373 (45%), Positives = 238/373 (63%), Gaps = 3/373 (0%)

Query: 3   EYDTLRLIWWGLIGALLIGFMITDGFDMGVGALLPILGQSESDKRVMINSIAPHWDGNQV 62
           +Y+TLR+IWW L+G LLIGF +TDGFD+G  ALLP  G+++ ++R++INS+   W+GNQV
Sbjct: 6   DYETLRVIWWLLLGVLLIGFALTDGFDLGSAALLPFAGRTDEERRMIINSVGATWEGNQV 65

Query: 63  WLITAGGALFAAWPLVYATSFSSLYIAMYLILLALWLRPLALEYRAKIDTPSWRKICDIS 122
           W I  GGA+FAAWP VYA SFS  Y+AM+L+L AL LRP+  +YR+K     WR   D +
Sbjct: 66  WFILGGGAIFAAWPFVYAVSFSGFYLAMFLVLSALILRPVGFKYRSKKPDARWRAGWDWA 125

Query: 123 ISLSGLIPPLLFGVAFGNLMQGLPFSLNALLMVDYHGSFIDLITPFSVLSGGIGVLMALV 182
           + + GL+P L+FGVA GN++ G PF L+  L + Y GS + L TPF++L+G + V M ++
Sbjct: 126 LFVGGLVPALVFGVAVGNVLVGAPFRLDGDLRMFYEGSLLGLFTPFTLLTGLLSVAMLVL 185

Query: 183 QGSAWLTLKTSDILHKKARLTAQISVLCLFGLFIIGGFMV--HGMNGYLIVSSLDYNAIS 240
            G+ WL+LKT   + ++ RL  Q + +    LF IGG  V   GM GY +   +D N  S
Sbjct: 186 HGAGWLSLKTEGPVLQRVRLYGQGAAILSILLFAIGGLFVAWSGM-GYRVDGVIDPNGPS 244

Query: 241 NPLNKVVFQQAGAWLTNFERYPWMWFAPMGGLMMAMGVFLSAKWKNDAITFVCASVTNAC 300
           NP        AGAWL N+  +PWM  AP+ G    +   L  + + D + F  +S+ N  
Sbjct: 245 NPHLGGAVAAAGAWLDNYAAHPWMLLAPILGFAGPVLALLGIRGRRDTLVFAGSSIANVG 304

Query: 301 IILTAGFAMFPFIMPSSFEPSHSLTLWDATSSERTLNIMTGVAFVMLPIILFYTAFSYRT 360
           II T G +MFPFI+PSS +P  SLT W+A+SS  TL  M     + LPI+L YTA++Y+ 
Sbjct: 305 IISTVGLSMFPFILPSSIDPGSSLTAWNASSSHGTLFTMLICTVIFLPIVLAYTAWAYKV 364

Query: 361 MFGRLDKQYIERN 373
           MFGR+  + I  N
Sbjct: 365 MFGRVTDREIRLN 377