Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., Cytochrome bd-I ubiquinol oxidase subunit 2 from Pseudomonas lactucae CFBP13502

 Score =  137 bits (344), Expect = 6e-37
 Identities = 103/365 (28%), Positives = 174/365 (47%), Gaps = 47/365 (12%)

Query: 7   LRLIWWGLIGALLIGFMITDGFDMGVGALLPILGQSESDKRVMINSIAPHWDGNQVWLIT 66
           L LIW  +I   ++ +++ DGFD+G+G L P + + ++D+ VM+N++AP WDGN+ WL+ 
Sbjct: 5   LPLIWAVIIIFGIMMYVVMDGFDLGIGILFPFV-KGKTDRDVMMNTVAPVWDGNETWLVL 63

Query: 67  AGGALFAAWPLVYATSFSSLYIAMYLILLALWLRPLALEYRAKIDTPSWRKICDISISLS 126
            G  LF A+PL Y+   S+LY+ + L+L+ L  R +A E+R K      R + D +    
Sbjct: 64  GGAGLFGAFPLAYSVVLSALYLPLILMLIGLIFRGVAFEFRFKAKDHK-RHLWDKAFIGG 122

Query: 127 GLIPPLLFGVAFGNLMQGLPFSLNALLMVDYHGSFIDLITPFSVLSGGIGVLMALVQGSA 186
            L      GVA G  + G+P     ++   + G  +D +TPF++  G   ++   + G  
Sbjct: 123 SLAATFFQGVALGAFIDGIP-----VVNRQFAGGSLDWLTPFTMFCGVALIVAYALLGCT 177

Query: 187 WLTLKT----SDILHKKARLTAQISVLCLFGLFIIGGFMVHGMNGYLIVSSLDYNAISNP 242
           WL +KT     + +H  AR  A + VL + G+  I   + H                   
Sbjct: 178 WLIMKTEGKLQEQMHNLARPLAFV-VLAVIGIVSIWTPLTHA------------------ 218

Query: 243 LNKVVFQQAGAWLTNFERYPWMWFAPMGGL-MMAMGVFLSAKWKNDAIT-FVCASVTNAC 300
                 + AG W T    +   WF P+  L ++ M   + A  +N   T F+   V    
Sbjct: 219 ------EIAGRWFTLPNLF---WFLPVPVLVLVTMYGLIRAVARNAHYTPFLLTLVLIFL 269

Query: 301 IILTAGFAMFPFIMPSSFEPSHSLTLWDATSSERTLNIMTGVAFVMLPIILFYTAFSYRT 360
                G +++P I+P       S+++WDA +  ++   M      ++P IL YT +SY  
Sbjct: 270 GYSGLGISLWPNIIPP------SVSIWDAAAPPQSQGFMLVGTLFIIPFILGYTFWSYYV 323

Query: 361 MFGRL 365
             G++
Sbjct: 324 FRGKV 328