Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 378 a.a., Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  370 bits (950), Expect = e-107
 Identities = 174/379 (45%), Positives = 254/379 (67%), Gaps = 2/379 (0%)

Query: 1   MFEYDTLRLIWWGLIGALLIGFMITDGFDMGVGALLPILGQSESDKRVMINSIAPHWDGN 60
           M +Y+TLR IWW LIG +L+ FM+TDGFDMGVG LLP++ +++ ++RV+INS+  HW+GN
Sbjct: 1   MLDYETLRFIWWLLIGVILVAFMVTDGFDMGVGCLLPLIARNDDERRVLINSVGAHWEGN 60

Query: 61  QVWLITAGGALFAAWPLVYATSFSSLYIAMYLILLALWLRPLALEYRAKIDTPSWRKICD 120
           QVWLI AGGALFAAWP VYA +FS  Y+AM L+L AL+ RPLA +YR KI    WR + D
Sbjct: 61  QVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCALFFRPLAFDYRGKIANARWRALWD 120

Query: 121 ISISLSGLIPPLLFGVAFGNLMQGLPFSLNALLMVDYHGSFIDLITPFSVLSGGIGVLMA 180
             + +  L+PP++FG+AFGNL  G+PF+    L VDY G+F  L++PF++L G + + + 
Sbjct: 121 TGLVIGSLVPPVVFGIAFGNLFLGVPFAFTPQLHVDYFGTFWQLLSPFALLCGLLSLSLV 180

Query: 181 LVQGSAWLTLKTSDILHKKARLTAQISVLCLFGLFIIGGFMV-HGMNGYLIVSSLDYNAI 239
           ++QG  WL LKT  ++ ++A    + S L +   F++ G+ +  G++G+++++  D N  
Sbjct: 181 IMQGGVWLQLKTEGVIRQRALSATRYSALLIVICFLLAGYWLWAGVDGFVLLTQ-DANGP 239

Query: 240 SNPLNKVVFQQAGAWLTNFERYPWMWFAPMGGLMMAMGVFLSAKWKNDAITFVCASVTNA 299
           SNPL K V    GAW+ +F R P +   P+ G+++ +  F +         F+ AS+T A
Sbjct: 240 SNPLLKGVAILPGAWMNHFIRSPLLLIIPLLGMILPILAFYACLRGQTIRGFLFASLTQA 299

Query: 300 CIILTAGFAMFPFIMPSSFEPSHSLTLWDATSSERTLNIMTGVAFVMLPIILFYTAFSYR 359
           C+I TAG  +FPF+MPSS  P  SLT+WD+TSS+ TL IM  +  + LPI+L YT +SY 
Sbjct: 300 CVIFTAGITLFPFVMPSSVSPLSSLTVWDSTSSQMTLEIMLVIVLIFLPIVLLYTLWSYY 359

Query: 360 TMFGRLDKQYIERNHHSLY 378
            M GR++   + RN H LY
Sbjct: 360 KMLGRINLGTLRRNDHELY 378