Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., cytochrome d oxidase, subunit II (cydB) from Kangiella aquimarina DSM 16071

 Score =  152 bits (383), Expect = 2e-41
 Identities = 104/360 (28%), Positives = 176/360 (48%), Gaps = 42/360 (11%)

Query: 9   LIWWGLIGALLIGFMITDGFDMGVGALLPILGQSESDKRVMINSIAPHWDGNQVWLITAG 68
           +IW GLI   ++ ++I DGFD+G+G L P + ++++D+   +NS+AP WDGN+ WL+  G
Sbjct: 11  MIWAGLIAFAVLAYIILDGFDLGIGILFPFI-KNKTDQETAMNSVAPIWDGNETWLVLGG 69

Query: 69  GALFAAWPLVYATSFSSLYIAMYLILLALWLRPLALEY--RAKIDTPSWRKICDISISLS 126
           G LFA +PL Y+    +LY+ + L+LL L  R +A E+  R K     W    D    L 
Sbjct: 70  GGLFAVFPLAYSVIMPALYMPIILMLLGLIFRGVAFEFHWRTKNSQDWW----DRGFFLG 125

Query: 127 GLIPPLLFGVAFGNLMQGLPFSLNALLMVDYHGSFIDLITPFSVLSGGIGVLMALVQGSA 186
            L+  L  G+A G L+QG+  +  A     Y G + D +TPFS+ +G   V+  ++ G+ 
Sbjct: 126 SLVATLCQGIALGALVQGITVADRA-----YAGGWWDWLTPFSITTGIALVVGYVLLGAT 180

Query: 187 WLTLKTSDILHKKARLTAQISV-LCLFGLFIIGGFMVHGMNGYLIVSSLDYNAISNPLNK 245
           WL +KT+D L K++   A+I+  L LF + II  +M+     YL                
Sbjct: 181 WLNMKTTDGLQKQSVQFAKIAAWLTLFFIGIISLWMIFIEQQYL---------------- 224

Query: 246 VVFQQAGAWLTNFERYPWMWFAPMGGLMMAMGVFLSAKWKNDAITFVCASVTNACIILTA 305
                   W      Y ++   P+  L     +        +   F+ A        +  
Sbjct: 225 ------HRWFDAPNVY-YLMVVPVAVLFCGFKLLYGLHKSREVSPFLYAIALFVLSYIGL 277

Query: 306 GFAMFPFIMPSSFEPSHSLTLWDATSSERTLNIMTGVAFVMLPIILFYTAFSYRTMFGRL 365
             + +P ++P       S+++W A + + +L  +   A  +LPII+ YT+++Y    G++
Sbjct: 278 LISFYPNLVPP------SISIWQAAAPDDSLKFLLVGASALLPIIIGYTSYAYWVFRGKV 331