Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., cytochrome d oxidase, subunit II (cydB) from Enterobacter asburiae PDN3

 Score =  415 bits (1066), Expect = e-120
 Identities = 195/379 (51%), Positives = 275/379 (72%), Gaps = 1/379 (0%)

Query: 1   MFEYDTLRLIWWGLIGALLIGFMITDGFDMGVGALLPILGQSESDKRVMINSIAPHWDGN 60
           M +Y+ LR IWW LIG LLIGF +TDGFDMGVG L   LG++++++R+MINSIAPHWDGN
Sbjct: 1   MIDYEVLRFIWWLLIGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGN 60

Query: 61  QVWLITAGGALFAAWPLVYATSFSSLYIAMYLILLALWLRPLALEYRAKIDTPSWRKICD 120
           QVWLITAGGALFAAWP+VYA +FS  Y+AM L+L +L+ RP+  +YR+KI+   WR + D
Sbjct: 61  QVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEDTRWRNMWD 120

Query: 121 ISISLSGLIPPLLFGVAFGNLMQGLPFSLNALLMVDYHGSFIDLITPFSVLSGGIGVLMA 180
             I +   +PPL+ GVAFGNL+QG+PF L+  + + Y G+F  L+ PF +L+G + V M 
Sbjct: 121 WGIFIGSFVPPLVIGVAFGNLLQGVPFHLDEYMRLYYTGNFFQLLNPFGLLAGVVSVAMI 180

Query: 181 LVQGSAWLTLKTSDILHKKARLTAQISVLCLFGLFIIGG-FMVHGMNGYLIVSSLDYNAI 239
           + QG+ +L ++T   LH ++R TAQ++ L     F + G ++V+G++GY++ S++++ A 
Sbjct: 181 ITQGATYLQMRTVGELHLRSRATAQVAALVTLVCFALAGVWVVYGIDGYVVTSAINHTAP 240

Query: 240 SNPLNKVVFQQAGAWLTNFERYPWMWFAPMGGLMMAMGVFLSAKWKNDAITFVCASVTNA 299
           SNPL K V +QAGAWL NF   P +W  P  G+++ +   L+++ +  A+ FV +S+T A
Sbjct: 241 SNPLTKEVARQAGAWLVNFNNTPALWAIPALGVLLPLLTVLTSRLEKGALAFVFSSLTLA 300

Query: 300 CIILTAGFAMFPFIMPSSFEPSHSLTLWDATSSERTLNIMTGVAFVMLPIILFYTAFSYR 359
           CIILT+G AMFPF+MPSS   + SLT+WDATSS  TLN+MT VA V +PI+L YT + Y 
Sbjct: 301 CIILTSGIAMFPFVMPSSTMLNASLTMWDATSSHMTLNLMTYVACVFVPIVLAYTIWCYW 360

Query: 360 TMFGRLDKQYIERNHHSLY 378
            MFGR+ K++IE N HS+Y
Sbjct: 361 KMFGRITKEHIESNTHSMY 379