Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., cytochrome d ubiquinol oxidase subunit II from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  154 bits (388), Expect = 4e-42
 Identities = 112/359 (31%), Positives = 170/359 (47%), Gaps = 36/359 (10%)

Query: 7   LRLIWWGLIGALLIGFMITDGFDMGVGALLPILGQSESDKRVMINSIAPHWDGNQVWLIT 66
           L L+W GL+   +  +++ DGFD+GVG L P L   +   + M NSIAP WDGN+ WLI 
Sbjct: 5   LTLVWAGLLAFAVFAYIVMDGFDLGVGILFPTLKAGDQRDKAM-NSIAPVWDGNETWLIL 63

Query: 67  AGGALFAAWPLVYATSFSSLYIAMYLILLALWLRPLALEYRAKIDTPSWRKICDISISLS 126
            GG LFAA+PL YA    ++Y  +  +LL L  R +A EYR +  T   + I D++    
Sbjct: 64  GGGGLFAAFPLAYAVLMPAVYTPIIAMLLGLVFRGVAFEYRWR--TVRAKPIWDVAFFGG 121

Query: 127 GLIPPLLFGVAFGNLMQGLPFSLNALLMVDYHGSFIDLITPFSVLSGGIGVLMALVQGSA 186
            L+     GV  G ++QG+  S  A     Y G   D ++PFS+L+G   V+   + G+ 
Sbjct: 122 SLLAAFSQGVTLGAILQGVEVSGRA-----YGGGSWDWLSPFSLLTGAAVVVGYALLGAT 176

Query: 187 WLTLKTSDILHKKARLTAQISVLCLFGLFIIGGFMVHGMNGYLIVSSLDYNAISNPLNKV 246
           WL +KT   L   AR  +Q   L    L +IG              SL    +     + 
Sbjct: 177 WLNMKTEGALQTHAR--SQAWKLGPATLLMIGAV------------SLATPFLDGEYARR 222

Query: 247 VFQQAGAWLTNFERYPWMWFAPMGGLMMAMGVFLSAKWKNDAITFVCASVTNACIILTAG 306
            F   G  LT           P+  L++A   F + + K +   F+ +    A      G
Sbjct: 223 WFDWPGVLLTA--------QVPLLVLIVAAAFFWTMRQKREVWPFLLSLGLFAVTFAGLG 274

Query: 307 FAMFPFIMPSSFEPSHSLTLWDATSSERTLNIMTGVAFVMLPIILFYTAFSYRTMFGRL 365
            ++FP+ +P        +TLW A +   +   M   A +++PIIL YTA++Y    G++
Sbjct: 275 VSVFPYAVPD------EITLWQAAAPASSQLFMLVGALILIPIILAYTAYAYWVFRGKV 327