Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., Cytochrome d ubiquinol oxidase subunit 2 from Alteromonas macleodii MIT1002

 Score =  113 bits (282), Expect = 9e-30
 Identities = 104/362 (28%), Positives = 161/362 (44%), Gaps = 47/362 (12%)

Query: 10  IWWGLIGALLIGFMITDGFDMGVGALLPILGQSESDKRVMINSIAPHWDGNQVWLITAGG 69
           I+ GL+G  ++ + I DG+D+GVG L+P   ++E+ +  MI SI P+WD N+ WL+ A G
Sbjct: 13  IYVGLLGLSVLLYAILDGYDLGVGVLIP--PRTEAFRDDMIASIGPYWDANETWLVLAIG 70

Query: 70  ALFAAWPLVYATSFSSLYIAMYLILLALWLRPLALEYRAKIDTPSWRKICDISISLSGLI 129
            L  A+P  ++    +LY+    +LL L +R +A ++RAK+     RK  D+      L+
Sbjct: 71  LLLIAFPEAHSEFLQTLYLPATFMLLGLIMRGVAFDFRAKVVQVKKRK-WDMVFKYGSLL 129

Query: 130 PPLLFGVAFGNLMQGLPFSLNALLMVDYHGSFIDLITPFSVLSGGIGVLMALVQGSAWLT 189
             L  G   G  + G        L  D       L+  F     G+    A + GS WL 
Sbjct: 130 TTLAQGYMLGIYVTG--------LRTDIWAQGFALLAAF-----GVTAAYAFI-GSCWLI 175

Query: 190 LKTSDILHKKARLTAQISVLCLFGLFIIGGFMVHGMNGYLIVSSLDYNAISNPLNKVVFQ 249
           LK    L +KA   A+  +    G+  +G   V   N  L     D   +S P   V+F 
Sbjct: 176 LKGEGELQQKAYYWARRGL----GVLAVGIVAVSIANLTLHDDVRDL-WLSAPWGYVLF- 229

Query: 250 QAGAWLTNFERYPWMWFAPMGGLMMAMGVFL----SAKWKNDAITFVCASVTNACIILTA 305
                       P   FA    L+   GV L     A+ K + + F  A +         
Sbjct: 230 ----------AIPVACFA----LLALCGVLLKKLPDAQGKGEWLPFFIALLVFLLCFTAF 275

Query: 306 GFAMFPFIMPSSFEPSHSLTLWDATSSERTLNIMTGVAFVMLPIILFYTAFSYRTMFGRL 365
           G + +PFI+P        +T+ DA S   +L  +     +++PIIL YTA  Y+   G+ 
Sbjct: 276 GISYYPFIIPG------QMTVMDALSDASSLRFLLVGVVIVVPIILAYTAMVYKIFSGKS 329

Query: 366 DK 367
           +K
Sbjct: 330 EK 331