Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., Cytochrome bd-I ubiquinol oxidase subunit 2 from Acinetobacter radioresistens SK82

 Score =  145 bits (366), Expect = 2e-39
 Identities = 108/360 (30%), Positives = 180/360 (50%), Gaps = 52/360 (14%)

Query: 7   LRLIWWGLIGALLIGFMITDGFDMGVGALLPILGQSESDKRVMINSIAPHWDGNQVWLIT 66
           L LIW  +IG  ++ +++ DGFD+G+G + P + Q E ++ VM+N++AP WDGN+ W++ 
Sbjct: 4   LSLIWVAIIGLGVLMYVVMDGFDLGIGIMFPFI-QGEQERDVMMNTVAPVWDGNETWMVL 62

Query: 67  AGGALFAAWPLVYATSFSSLYIAMYLILLALWLRPLALEYRAKIDTPSWRKICDISISLS 126
            G  LFAA+P+VY+   S+LY+ + L+++ L  R +A E+R K +    +   D S  L 
Sbjct: 63  GGAGLFAAFPIVYSAVLSALYMPIILMVVFLVFRGVAFEFRFKANRT--KHFWDKSFILG 120

Query: 127 GLIPPLLFGVAFGNLMQGLPFSLNALLMVDYHGSFIDLITPFSVLSGGIGVLMALVQGSA 186
            L+     GV  G  +QG+  +        Y G  +D +TPFS+ +G   V+M    G  
Sbjct: 121 SLLSSFFQGVILGAYIQGIKIADGR-----YIGGALDWLTPFSLFTGVGVVVMYATLGCG 175

Query: 187 WLTLKTSDILHKKARLTAQISVLCLFGLFIIGGFMVHGMNGYLIVSSLDYNAIS--NPLN 244
           WL +KT   L +K                     M H M   LI   + + AIS   P  
Sbjct: 176 WLIMKTDHDLQQK---------------------MFHLMPKMLIALLVIFAAISLYTPFA 214

Query: 245 KVVFQQAGAWLTNFERYPWM-WFAPMGGLMMAMGVFL--SAKWKNDAITFVCASVTNACI 301
           + +   A  W T     P++ +F+P+  L++   V    + K +N+   F+    T A +
Sbjct: 215 QPLI--AERWFTQ----PYLTYFSPVPILVVIFTVLALRAVKKQNEHKPFI---FTLALV 265

Query: 302 ILT-AGF--AMFPFIMPSSFEPSHSLTLWDATSSERTLNIMTGVAFVMLPIILFYTAFSY 358
            L   GF  +++P+I+P      + +T+W A +   +       A +++PIIL YT  +Y
Sbjct: 266 FLAFTGFLISLWPYIIP------YDVTIWQAAAPHSSQLFTLVGAVILIPIILAYTGLAY 319