Pairwise Alignments

Query, 530 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  224 bits (570), Expect = 7e-63
 Identities = 119/310 (38%), Positives = 175/310 (56%), Gaps = 9/310 (2%)

Query: 7   DVVELSRLQFALTAMFHFLFVPLTIGMSCLLAIMESIYVLTGKQIYQDMTRFWGKLFGIN 66
           D V L+R+QFA T  FH +F   TIG+S  +A +E I++ TGK ++  + RFW K+F ++
Sbjct: 4   DPVTLARMQFAFTVSFHVIFPAFTIGLSAFIATLELIWLKTGKDVFHRLARFWTKIFAVS 63

Query: 67  FALGVTTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWSRLS 126
           FA+GV +G+ + +QFGTNWS Y+ +VG +    +  E L AFFLE+TF+G+  FGW+R+ 
Sbjct: 64  FAMGVVSGIVLSYQFGTNWSRYAEFVGSVIAPLIGFEVLTAFFLEATFLGIMLFGWNRVP 123

Query: 127 KRQHLLITWLVALGSSFSALWILVANGWMQNPVGAEFNYQTMRMEMTSFAEVVLNPVAQV 186
              H+L   +VA G+  SA WIL AN WMQ P G E            + E++ NP    
Sbjct: 124 PWLHVLSCCVVAFGTFMSAFWILAANSWMQTPAGYEIRNGV--GYPLDWLEIIFNPSFHW 181

Query: 187 KFLHTVASAYTCGAMFILGVSSYYLLQGRDIEFARRSFAIAATFGMAAIISVI--VLGDE 244
           +  H + +AY   ++ +L V + YLL G+  + ++    +    GM AI+  I   +GD 
Sbjct: 182 RLPHMLLAAYLTTSLVVLSVGARYLLAGKFKDESKVMMVMG--IGMLAIVGPIQAFVGDS 239

Query: 245 SGYKLGDVQKVKLAAIEAEW-HTEPAPAAFTLFGLPNQKEGKTDYAIKIPYLMGLIATRS 303
            G      Q  K+AA+EA W  T+PAP    LF  P++K  K  + I IP+   L+ T S
Sbjct: 240 HGLNTAHYQPAKIAAVEAHWDSTKPAP--LVLFAWPDEKAEKNLFEISIPHGASLMITHS 297

Query: 304 FDEQVTGLHD 313
            D    GL D
Sbjct: 298 LDGLFPGLKD 307



 Score = 67.4 bits (163), Expect = 1e-15
 Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 4/123 (3%)

Query: 385 PTVWPLFWSFRIMVGCGFIMLFV--FGAALLQTCRQRITHKPWVLKAALWSIPLPWIAIE 442
           P V+  F+ FR MVG G +M+ +   GA L+   R+  T   W L    W+ PL +IAI 
Sbjct: 314 PPVFGPFFGFRAMVGVGVVMILLGWIGAWLIFKGRETTTR--WYLVVTSWAWPLGFIAIL 371

Query: 443 AGWFVAEYGRQPWAIGEVLPVTVAVSSQTFENLITSLAIILSLYTVFIFVESYLIVTVAR 502
           +GW V E GRQPW +  +L    A+S      +  SL + + +Y V      + +  +  
Sbjct: 372 SGWIVTEQGRQPWVVEGLLRTEDAMSPLAGWTVGLSLTLFIIIYAVIFATGIHFMNRLIV 431

Query: 503 KGP 505
           +GP
Sbjct: 432 RGP 434