Pairwise Alignments

Query, 530 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 525 a.a., Cytochrome bd-I ubiquinol oxidase subunit 1 from Xanthobacter sp. DMC5

 Score =  579 bits (1493), Expect = e-170
 Identities = 285/505 (56%), Positives = 372/505 (73%), Gaps = 4/505 (0%)

Query: 5   MIDVVELSRLQFALTAMFHFLFVPLTIGMSCLLAIMESIYVLTGKQIYQDMTRFWGKLFG 64
           ++D V+LSRLQFA+TA++HFLFVPLT+G+S LLAIME++YV+TG+ I++ MT+FWG LFG
Sbjct: 2   ILDTVDLSRLQFAVTALYHFLFVPLTLGLSVLLAIMETVYVMTGRPIWRQMTKFWGTLFG 61

Query: 65  INFALGVTTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWSR 124
           INF LGV TG+ MEFQFG NWSYYSHYVGDIFGAPLAIE L+AFFLE+TFVGLFFFGW R
Sbjct: 62  INFVLGVATGIVMEFQFGMNWSYYSHYVGDIFGAPLAIEGLMAFFLEATFVGLFFFGWDR 121

Query: 125 LSKRQHLLITWLVALGSSFSALWILVANGWMQNPVGAEFNYQTMRMEMTSFAEVVLNPVA 184
           LSK  HL+ T+ VA+GS+ SALWIL+ANGWMQNP GA FN QTMRME++ F  V+ NPVA
Sbjct: 122 LSKVGHLVTTYAVAMGSNLSALWILIANGWMQNPTGAAFNPQTMRMEVSDFYAVLFNPVA 181

Query: 185 QVKFLHTVASAYTCGAMFILGVSSYYLLQGRDIEFARRSFAIAATFGMAAIISVIVLGDE 244
           Q KF+HTV++ Y   + F+LGVS++YLL+GR I+ A+RS  +AA+FG+AA +SV+VLGDE
Sbjct: 182 QAKFVHTVSAGYVTASFFVLGVSAWYLLKGRHIDLAKRSMTVAASFGLAASLSVVVLGDE 241

Query: 245 SGYKLGDVQKVKLAAIEAEWHTEPAPAAFTLFGLPNQKEGKTDYAIKIPYLMGLIATRSF 304
           SGY  G+ QK+KLAAIEA W TEPAPA FT+ GLP+Q   +T +A+++P+++GLIATR+ 
Sbjct: 242 SGYLDGEHQKMKLAAIEAMWETEPAPAGFTIVGLPDQAARETRFAVRVPWVLGLIATRTL 301

Query: 305 DEQVTGLHDLRHEHLLRIRNGMVAYQLLERLQAGDASV----ETQRKFEQTKHDLGYGLL 360
             Q+ G+ +L      RI++G+VA+  L++++A  +S       ++ FE    +LGY LL
Sbjct: 302 TTQIPGIEELVGHAETRIKSGIVAFDALQQIRAAGSSAAIAPAVKQAFEDNGGNLGYALL 361

Query: 361 LKRYTDTITDANEAQIQQAADDSMPTVWPLFWSFRIMVGCGFIMLFVFGAALLQTCRQRI 420
           LKRY D    A  A++ QAA D++P V  LFWSFR+MVG GF  +         + R+R+
Sbjct: 362 LKRYVDDPRKATAAEVNQAAWDTVPNVPTLFWSFRVMVGLGFFFIAFTAFVFYLSARRRL 421

Query: 421 THKPWVLKAALWSIPLPWIAIEAGWFVAEYGRQPWAIGEVLPVTVAVSSQTFENLITSLA 480
                +L  A+ +IPLPWIA E GW VAE GRQPW I  VLP   AVSS     ++ +LA
Sbjct: 422 DRSRTLLWIAVLAIPLPWIAAELGWVVAEVGRQPWIIEGVLPTAAAVSSLGAGTVLATLA 481

Query: 481 IILSLYTVFIFVESYLIVTVARKGP 505
              ++YTV I VE  L+    RKGP
Sbjct: 482 GFAAIYTVLIVVEMTLMFRAIRKGP 506