Pairwise Alignments

Query, 530 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

 Score =  844 bits (2180), Expect = 0.0
 Identities = 404/516 (78%), Positives = 462/516 (89%)

Query: 2   GAFMIDVVELSRLQFALTAMFHFLFVPLTIGMSCLLAIMESIYVLTGKQIYQDMTRFWGK 61
           G  MIDVV+LSRLQFALTAM+HFLFVPLT+GM+ LLAIMES+YV+T KQIY+DMT+FWGK
Sbjct: 11  GVTMIDVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGK 70

Query: 62  LFGINFALGVTTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFG 121
           LFGINFALGV TGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFG
Sbjct: 71  LFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFG 130

Query: 122 WSRLSKRQHLLITWLVALGSSFSALWILVANGWMQNPVGAEFNYQTMRMEMTSFAEVVLN 181
           W RLSKRQHL++TWLVALGS+FSALWILVANGWMQNPVG+EFN++TMRMEM SFA+VVLN
Sbjct: 131 WDRLSKRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLN 190

Query: 182 PVAQVKFLHTVASAYTCGAMFILGVSSYYLLQGRDIEFARRSFAIAATFGMAAIISVIVL 241
           PVAQVKF+HTVA+ YT GAMFILG+S+YYLL+GRD+ FARRSFAIAA+FGMA+++SVIVL
Sbjct: 191 PVAQVKFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVL 250

Query: 242 GDESGYKLGDVQKVKLAAIEAEWHTEPAPAAFTLFGLPNQKEGKTDYAIKIPYLMGLIAT 301
           GDESGY+LG+VQ+VKLAAIE+EWHTEPAPAAFTLFG+PNQ+E +TDYAIKIP+ +G+IAT
Sbjct: 251 GDESGYELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYAIKIPFALGIIAT 310

Query: 302 RSFDEQVTGLHDLRHEHLLRIRNGMVAYQLLERLQAGDASVETQRKFEQTKHDLGYGLLL 361
           RS DEQV GL DLR EH+ RIR G+ AY LLERL+AG+ + E    F++ KHDLGYGLLL
Sbjct: 311 RSLDEQVVGLRDLRDEHVERIRTGIYAYDLLERLRAGEKTPENMAAFDEVKHDLGYGLLL 370

Query: 362 KRYTDTITDANEAQIQQAADDSMPTVWPLFWSFRIMVGCGFIMLFVFGAALLQTCRQRIT 421
           KRYTD +TDA E QIQ AADDS+PTVWPLFWSFRIMV CGFIML VFGAA +QTCRQ+I 
Sbjct: 371 KRYTDKVTDATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQKIE 430

Query: 422 HKPWVLKAALWSIPLPWIAIEAGWFVAEYGRQPWAIGEVLPVTVAVSSQTFENLITSLAI 481
            K WVLKAAL+SIPLPWIA+E GWFVAEYGRQPWA+GE+LPV VA S+ +   +ITS+  
Sbjct: 431 QKKWVLKAALFSIPLPWIAVETGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSMLA 490

Query: 482 ILSLYTVFIFVESYLIVTVARKGPSSLKTGRYQDEQ 517
           IL+LYT+F+  E YL+V   RKGPSSLKTGRY  EQ
Sbjct: 491 ILALYTIFLIAEVYLMVKFTRKGPSSLKTGRYHFEQ 526