Pairwise Alignments

Query, 530 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

 Score =  218 bits (555), Expect = 4e-61
 Identities = 118/314 (37%), Positives = 174/314 (55%), Gaps = 3/314 (0%)

Query: 5   MIDVVELSRLQFALTAMFHFLFVPLTIGMSCLLAIMESIYVLTGKQIYQDMTRFWGKLFG 64
           M+D + LSR+QFA    FH LF  +TI +  +L   +  Y+ T    + D+  FW K+F 
Sbjct: 1   MLDTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFA 60

Query: 65  INFALGVTTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWSR 124
           + FALGV +G+TM FQFGTNW  +   VG++ G  L  E + AFF+E+TF+G+  FG  R
Sbjct: 61  LTFALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGR 120

Query: 125 LSKRQHLLITWLVALGSSFSALWILVANGWMQNPVGAEFNYQTMRMEMTSFAEVVLNPVA 184
           + +  H L T LVA+G+S SA WILV N WM  P G E       + +TS+ EV+ NP  
Sbjct: 121 VPEWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAGYEVIDGV--VHVTSWKEVIFNPSM 178

Query: 185 QVKFLHTVASAYTCGAMFILGVSSYYLLQGRDIEFARRSFAIAATFGMAAIISVIVLGDE 244
             +  HT+ ++    +  I G+S+Y +L+    + A+    +A +    AI   I++GD 
Sbjct: 179 PYRLAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDL 238

Query: 245 SGYKLGDVQKVKLAAIEAEWHTEPAPAAFTLFGLPNQKEGKTDYAIKIPYLMGLIATRSF 304
            G    + Q  K+AA+E  W TE   A   LF LPN++    D+A+ IP L  LI T   
Sbjct: 239 HGLNTLEHQPAKIAAMEGVWQTERG-APLLLFALPNEETRSNDFALGIPNLASLILTHDM 297

Query: 305 DEQVTGLHDLRHEH 318
           + ++ GL     +H
Sbjct: 298 NGEIVGLDAFAPDH 311