Pairwise Alignments

Query, 530 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., cytochrome ubiquinol oxidase subunit I from Pantoea agglomerans CFBP13505 P0401

 Score =  236 bits (602), Expect = 1e-66
 Identities = 121/317 (38%), Positives = 183/317 (57%), Gaps = 7/317 (2%)

Query: 4   FMIDVVELSRLQFALTAMFHFLFVPLTIGMSCLLAIMESIYVLTGKQIYQDMTRFWGKLF 63
           F +D   L+R+QFA T  FH +F  +TIG++  LA++E +++ T  Q Y+D+  FW K+F
Sbjct: 2   FGLDAFHLARIQFAFTVSFHIIFPAITIGLASFLAVLEGMWLKTRDQTYRDLYHFWSKIF 61

Query: 64  GINFALGVTTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWS 123
            +NF +GV +GL M +QFGTNWS +S + G I G  L  E L AFFLE+ F+G+  FGW+
Sbjct: 62  AVNFGMGVVSGLVMAYQFGTNWSGFSEFAGSITGPLLTYEVLTAFFLEAGFLGVMLFGWN 121

Query: 124 RLSKRQHLLITWLVALGSSFSALWILVANGWMQNPVGAEFNYQTMRMEMTSFAEVVLNPV 183
           R+    H   T +VALG+  S  WIL +N WM  P G  +  Q   +    + ++V NP 
Sbjct: 122 RVGPGLHFFATCMVALGTLISTFWILASNSWMHTPQG--YIIQNGIVVPQDWFKIVFNPS 179

Query: 184 AQVKFLHTVASAYTCGAMFILGVSSYYLLQGRDIEFARRSFAIAATFGMAAIISVI--VL 241
              +  H   +A+   A F+   ++++LL+G +    R+ F++A    MA I++ I  ++
Sbjct: 180 FPYRLFHMSVAAFLASAFFVGSSAAWHLLKGNNNPAIRKMFSMA--LWMALIVAPIQAMI 237

Query: 242 GDESGYKLGDVQKVKLAAIEAEWHTEPAPAA-FTLFGLPNQKEGKTDYAIKIPYLMGLIA 300
           GD  G    + Q  K+AAIE  W   P  A    LFG+P+ ++ +T YA+++PYL  LI 
Sbjct: 238 GDAHGLNTLEHQPAKIAAIEGHWENPPGEATPLILFGIPDMEQERTKYALEVPYLGSLIL 297

Query: 301 TRSFDEQVTGLHDLRHE 317
           T S D+QV  L     E
Sbjct: 298 THSLDKQVPALKSFPKE 314



 Score = 64.7 bits (156), Expect = 7e-15
 Identities = 45/157 (28%), Positives = 71/157 (45%)

Query: 349 EQTKHDLGYGLLLKRYTDTITDANEAQIQQAADDSMPTVWPLFWSFRIMVGCGFIMLFVF 408
           E+TK+ L    L         D     ++    +  P    +FWSFR+MV  G +M+ + 
Sbjct: 281 ERTKYALEVPYLGSLILTHSLDKQVPALKSFPKEDRPNSTIIFWSFRVMVALGLLMITLG 340

Query: 409 GAALLQTCRQRITHKPWVLKAALWSIPLPWIAIEAGWFVAEYGRQPWAIGEVLPVTVAVS 468
             +L    + R+      L  AL   P   IAI AGWF  E GRQPW +  V     AVS
Sbjct: 341 VVSLWLRFKGRLYESRPFLWFALLMGPSGLIAILAGWFTTEIGRQPWVVYGVQRTIDAVS 400

Query: 469 SQTFENLITSLAIILSLYTVFIFVESYLIVTVARKGP 505
           +    ++  SL   + +Y+    V  + ++ + ++GP
Sbjct: 401 AHGDMHMSISLLAFILVYSSVFGVGYHYMMRLIKQGP 437