Pairwise Alignments

Query, 530 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 514 a.a., cytochrome bd-II oxidase, subunit I (NCBI) from Escherichia coli BW25113

 Score =  616 bits (1588), Expect = 0.0
 Identities = 302/513 (58%), Positives = 382/513 (74%)

Query: 5   MIDVVELSRLQFALTAMFHFLFVPLTIGMSCLLAIMESIYVLTGKQIYQDMTRFWGKLFG 64
           M DV++LSR QFALTA++HFLFVPLT+G+  LLAIME+IYV+TGK IY+DMTRFWGKLFG
Sbjct: 1   MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60

Query: 65  INFALGVTTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWSR 124
           INFALGV TGLTMEFQFGTNWS+YS+YVGDIFGAPLA+EAL+AFFLESTFVGLFFFGW R
Sbjct: 61  INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120

Query: 125 LSKRQHLLITWLVALGSSFSALWILVANGWMQNPVGAEFNYQTMRMEMTSFAEVVLNPVA 184
           L+K QHLL+TWLVA GS+ SALWIL ANGWMQ P GA F+  T+RMEMTSF+E+V NPV+
Sbjct: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180

Query: 185 QVKFLHTVASAYTCGAMFILGVSSYYLLQGRDIEFARRSFAIAATFGMAAIISVIVLGDE 244
           QVKF+HTV + Y  GAMFI+ +S++YLL+GR+   A RSFAI + FG  AII  + LGD 
Sbjct: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240

Query: 245 SGYKLGDVQKVKLAAIEAEWHTEPAPAAFTLFGLPNQKEGKTDYAIKIPYLMGLIATRSF 304
           S Y++  VQ VKLAA+E EW TEPAPA F +   P Q + +  +A+KIP L+G++AT S 
Sbjct: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300

Query: 305 DEQVTGLHDLRHEHLLRIRNGMVAYQLLERLQAGDASVETQRKFEQTKHDLGYGLLLKRY 364
           D+ V GL +L  E   R++ G +A+ L++ +  G+      + F   + DLGYG+LL RY
Sbjct: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360

Query: 365 TDTITDANEAQIQQAADDSMPTVWPLFWSFRIMVGCGFIMLFVFGAALLQTCRQRITHKP 424
              +     AQ Q A   ++P V P+FWSFRIMVGCG ++L V   AL+QT R +I    
Sbjct: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420

Query: 425 WVLKAALWSIPLPWIAIEAGWFVAEYGRQPWAIGEVLPVTVAVSSQTFENLITSLAIILS 484
           WVLK ALWS+PLPWIAIEAGWF+ E+GRQPWAI ++LP   A S+ T   L  SL +I+ 
Sbjct: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480

Query: 485 LYTVFIFVESYLIVTVARKGPSSLKTGRYQDEQ 517
           LYT+F+  E YL+   AR GPS++++ +   +Q
Sbjct: 481 LYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQ 513