Pairwise Alignments

Query, 530 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., Cytochrome bd-type quinol oxidase, subunit 1 from Enterobacter asburiae PDN3

 Score =  232 bits (591), Expect = 3e-65
 Identities = 117/315 (37%), Positives = 174/315 (55%), Gaps = 3/315 (0%)

Query: 4   FMIDVVELSRLQFALTAMFHFLFVPLTIGMSCLLAIMESIYVLTGKQIYQDMTRFWGKLF 63
           F +D   L+R+QFA T  FH LF  +TIG++  L ++E +++ T   +++ +  FW K+F
Sbjct: 2   FELDAFHLARIQFAFTVSFHILFPAITIGLASYLVVLEGMWLRTKNDVWRSLYHFWLKIF 61

Query: 64  GINFALGVTTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWS 123
            +NF +GV +GL M +QFGTNWS +S + G I G  L  E L AFFLE+ F+G+  FGW+
Sbjct: 62  AVNFGMGVVSGLVMAYQFGTNWSGFSQFAGSITGPLLTYEVLTAFFLEAGFLGVMMFGWN 121

Query: 124 RLSKRQHLLITWLVALGSSFSALWILVANGWMQNPVGAEFNYQTMRMEMTSFAEVVLNPV 183
           ++    H   T +VALG+  S  WIL +N WM  P G  F  +  ++    +  +V NP 
Sbjct: 122 KVGPGLHFFSTCMVALGTLMSTFWILASNSWMHTPQG--FTIENGQVIPQDWLAIVFNPS 179

Query: 184 AQVKFLHTVASAYTCGAMFILGVSSYYLLQGRDIEFARRSFAIAATFGMAAIISVIVLGD 243
              + +H   +A+   A+F+    +++LL+G D    R  F++A    +       V+GD
Sbjct: 180 FPYRLIHMAIAAFLSSALFVGASGAWHLLRGNDTPAVRTMFSMAMWMALLVAPIQAVVGD 239

Query: 244 ESGYKLGDVQKVKLAAIEAEWHTEPAPAA-FTLFGLPNQKEGKTDYAIKIPYLMGLIATR 302
             G    + Q  K+AAIE  W   P  A    LFGLP+  E +T Y ++IP L  LI T 
Sbjct: 240 MHGLNTLEHQPAKIAAIEGHWENPPGEATPLLLFGLPDMDEERTKYGLEIPALGSLILTH 299

Query: 303 SFDEQVTGLHDLRHE 317
           S D+QV  L D   E
Sbjct: 300 SLDKQVPALKDFPKE 314



 Score = 67.4 bits (163), Expect = 1e-15
 Identities = 46/162 (28%), Positives = 70/162 (43%)

Query: 349 EQTKHDLGYGLLLKRYTDTITDANEAQIQQAADDSMPTVWPLFWSFRIMVGCGFIMLFVF 408
           E+TK+ L    L         D     ++    +  P    +FWSFR+MVG G +M+ + 
Sbjct: 281 ERTKYGLEIPALGSLILTHSLDKQVPALKDFPKEDRPNSTIVFWSFRVMVGMGLLMITLG 340

Query: 409 GAALLQTCRQRITHKPWVLKAALWSIPLPWIAIEAGWFVAEYGRQPWAIGEVLPVTVAVS 468
             ++    R R+ H       AL   P   +A+ AGW   E GRQPW +   L    AVS
Sbjct: 341 LISVWLRYRHRLFHSRPFHWFALCMGPAGLLALLAGWVTTEVGRQPWVVYGYLRTIDAVS 400

Query: 469 SQTFENLITSLAIILSLYTVFIFVESYLIVTVARKGPSSLKT 510
             +   +  SL     +YT    V    ++ + +KGP  + T
Sbjct: 401 LHSTLQMSISLLAFFVVYTSVFGVGYVYLIRLIKKGPQPVDT 442