Pairwise Alignments

Query, 530 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 466 a.a., Cytochrome bd-type quinol oxidase, subunit 1 from Enterobacter asburiae PDN3

 Score =  241 bits (616), Expect = 3e-68
 Identities = 159/509 (31%), Positives = 242/509 (47%), Gaps = 70/509 (13%)

Query: 4   FMIDVVELSRLQFALTAMFHFLFVPLTIGMSCLLAIMESIYVLTGKQIYQDMTRFWGKLF 63
           F +D   L+R+QFA T  FH +F  +TIG++  LA++E +++ T   +++ +  FW K+F
Sbjct: 2   FGLDAFHLARIQFAFTVSFHIIFPAITIGLASYLAVLEGLWLKTKNPVWRSLYHFWSKIF 61

Query: 64  GINFALGVTTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWS 123
            +NF +GV +GL M +QFGTNWS +S + G I G  L  E L AFFLE+ F+G+  FGW+
Sbjct: 62  AVNFGMGVVSGLVMAYQFGTNWSGFSQFAGSITGPLLTYEVLTAFFLEAGFLGVMLFGWN 121

Query: 124 RLSKRQHLLITWLVALGSSFSALWILVANGWMQNPVGAEF-NYQTMRMEMTSFAEVVLNP 182
           ++    H   T +VALG+  S  WIL +N WMQ P G E  N Q + ++   +  VV NP
Sbjct: 122 KVGPGLHFFATCMVALGTIISTFWILSSNSWMQTPQGYEIVNGQVVPVD---WFAVVFNP 178

Query: 183 VAQVKFLHTVASAYTCGAMFILGVSSYYLLQGRDIEFARRSFAIAATFGMAAIISVIVLG 242
               + LH   +A+   A+F+   ++++LL+G +    R  F++A    +       ++G
Sbjct: 179 SFPYRLLHMSIAAFLSSALFVGASAAWHLLRGNNTPAIRAMFSMALWMTLIVAPIQAMVG 238

Query: 243 DESGYKLGDVQKVKLAAIEAEWHTEPA-PAAFTLFGLPNQKEGKTDYAIKIPYLMGLIAT 301
           D  G      Q  K+AAIE  W   P  P    LFG P+ ++ +T + ++IP L  LI T
Sbjct: 239 DMHGLNTLKHQPAKIAAIEGHWENPPGEPTPLLLFGWPDMEQERTRFGLEIPALGSLILT 298

Query: 302 RSFDEQVTGLHDLRHEHLLRIRNGMVAYQLLERLQAGDASVETQRKFEQTKHDLGYGLLL 361
            S D+QV  L +   E   R  + +V +    R+ AG                LG  +LL
Sbjct: 299 HSLDKQVPALKEFAKED--RPNSTIVFWSF--RIMAG----------------LGMLMLL 338

Query: 362 KRYTDTITDANEAQIQQAADDSMPTVWPLFWSFRIMVGCGFIMLFVFGAALLQTCRQRIT 421
              T     A   + ++    S P +W     F +++G                      
Sbjct: 339 LGVT-----ALWLRYKKRVYSSRPFLW-----FALLMG---------------------- 366

Query: 422 HKPWVLKAALWSIPLPWIAIEAGWFVAEYGRQPWAIGEVLPVTVAVSSQTFENLITSLAI 481
                        P   IAI AGW   E GRQPW +  +     AVS+    ++  SL  
Sbjct: 367 -------------PTGLIAILAGWITTEVGRQPWVVYGLQRTKDAVSAHGDLHMSVSLLA 413

Query: 482 ILSLYTVFIFVESYLIVTVARKGPSSLKT 510
              +YT    V    +V + RKGP   +T
Sbjct: 414 FFVVYTSVFGVGYSYMVRLIRKGPQPHET 442