Pairwise Alignments

Query, 530 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., Cytochrome bd-type quinol oxidase, subunit 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  153 bits (386), Expect = 1e-41
 Identities = 90/314 (28%), Positives = 157/314 (50%), Gaps = 5/314 (1%)

Query: 6   IDVVELSRLQFALTAMFHFLFVPLTIGMSCLLAIMESIYVLTGKQIYQDMTRFWGKLFGI 65
           +D +  +R Q AL+  FH +F  + + M  L+AI    ++ +GK+ Y+ +T+ W K   I
Sbjct: 1   MDDLMAARSQMALSLGFHIIFACIGMIMPFLMAISHYKFLRSGKEKYKVLTKAWSKGVAI 60

Query: 66  NFALGVTTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWSRL 125
            F  G  +G  + F+ G  W  +  + G IFG P ++E   AFF+E+  +G F +GW + 
Sbjct: 61  FFVTGAVSGTMLSFELGLLWPEFMKHAGPIFGMPFSLEG-TAFFIEAIALGFFLYGWEKF 119

Query: 126 SKRQHLLITWLVALGSSFSALWILVANGWMQNPVGAEFNYQTMRMEMTSFAEVVLNPVAQ 185
           +   H     +V +    S + ++ AN WM +P G  F+Y             + N    
Sbjct: 120 NPWFHWFTGVVVGISGLASGILVVAANAWMNSPAG--FDYVNGEYLNIDPMAAMFNDAWF 177

Query: 186 VKFLHTVASAYTCGAMFILGVSSYYLLQGRDIEFARRSFAIAATFGMAAIISVIVLGDES 245
            + LH + +A+      + G+ ++ L +G++    + +  I+ T G  A I   + GD S
Sbjct: 178 TQALHMILAAFVATCFAVAGIHAWMLTKGKNSPIHKAALKISLTIGAVAAILQPISGDLS 237

Query: 246 GYKLGDVQKVKLAAIEAEWHTEPAPAAFTLFGLPNQKEGKTDYAIKIPYLMGLIATRSFD 305
              +   Q  KLAA+EA + TE + A   + G+P+++    +YAIK+P  +  +A   F+
Sbjct: 238 AKDVAVRQPAKLAAMEAHFKTETS-APLIIGGIPDEENQTVNYAIKLPGALSFLAHGDFN 296

Query: 306 EQVTGLHDL-RHEH 318
             VTGL  + + EH
Sbjct: 297 ASVTGLDQIPKDEH 310



 Score = 61.6 bits (148), Expect = 6e-14
 Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 370 DANEAQIQQAADDSMPTVWPLFWSFRIMVGCGFIMLFVFGAALLQTCR-QRITHKPWVLK 428
           +A+   + Q   D  P V    ++F+IMVGCG +++      LL   + +R  +    L 
Sbjct: 296 NASVTGLDQIPKDEHPPVTVTHFAFQIMVGCGMLLMLTGIVWLLGLWKNKRFIYSKRFLG 355

Query: 429 AALWSIPLPWIAIEAGWFVAEYGRQPWAIGEVLPVTVAVSSQTFENLITSLAIILSLYTV 488
                 PL +IA+EAGWFV E GRQPW +  ++    AV+      ++ S  +   +Y  
Sbjct: 356 LIALLTPLGFIAVEAGWFVTEVGRQPWILYGIMKTKEAVT--PMPGIVYSFILYAVIYLS 413

Query: 489 FIFVESYLIV 498
              + S L+V
Sbjct: 414 LAGIVSLLLV 423