Pairwise Alignments

Query, 473 a.a., PLP-dependent aminotransferase family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., Uncharacterized HTH-type transcriptional regulator YdcR from Escherichia coli ECRC62

 Score =  434 bits (1117), Expect = e-126
 Identities = 223/465 (47%), Positives = 305/465 (65%), Gaps = 1/465 (0%)

Query: 2   MKKSQVLANTIKSQIEQNIWLSGEKIPSIRSTCKRYKLSIETVLQAYQQLEDQGYIRAKA 61
           MKK Q LA  ++ QI   IW  G+++PS+R       +S  TV  AYQ LE QGYI A+ 
Sbjct: 1   MKKYQQLAEQLREQIASGIWQPGDRLPSLRDQVALSGMSFMTVSHAYQLLESQGYIIARP 60

Query: 62  KSGYVVLPRRNTLFAGNLSAKVIKPYPVKISDLLYDVLQRAKDPEIIPFSSAFPDPALFP 121
           +SGY V P+   +    +   V +   V I+  ++D+LQ ++DP ++PF+SAFPDP LFP
Sbjct: 61  QSGYYVAPQAIKMPKAPV-IPVTRDEAVDINTYIFDMLQASRDPSVVPFASAFPDPRLFP 119

Query: 122 HQALSRSLANASRQMLGSCMLTNLPPGSQTLRRQIAQRYQKSGLNVLPDDIVITSGAMEA 181
            Q L+RSLA  S+      ++ NLPPG+  LR+ IA+RY   G+ + PD+IVIT+GA+EA
Sbjct: 120 LQQLNRSLAQVSKTATAMSVIENLPPGNAELRQAIARRYALQGITISPDEIVITAGALEA 179

Query: 182 LNLCLQSCTKPGDLVAIEYPAFYGVLQAIERLNLTAVEIPTDPRDGIDLDVLASVFSSMD 241
           LNL LQ+ T+PGD V +E P FYG LQA+ERL L A+ + TD ++GIDL  L        
Sbjct: 180 LNLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSVATDVKEGIDLQALELALQEYP 239

Query: 242 IKACWFMTESQNPLGYSMSETNKQRLAELVNHYQIPMIEDDVYRELGIGNPSSLPAKAYD 301
           +KACW MT SQNPLG++++   K +L  L+N Y + +IEDDVY EL  G    LPAKA+D
Sbjct: 240 VKACWLMTNSQNPLGFTLTPQKKAQLVALLNQYNVTLIEDDVYSELYFGREKPLPAKAWD 299

Query: 302 KVGNILLCGSFSKSLSPGFRIGWVVAGERALNIQRLQHLSTLSSSIPIQLGLSHYLTFYN 361
           +   +L C SFSK L PGFRIGWV AG+ A  IQRLQ +STLS+S P+QL L  YL+   
Sbjct: 300 RHDGVLHCSSFSKCLVPGFRIGWVAAGKHARKIQRLQLMSTLSTSSPMQLALVDYLSTRR 359

Query: 362 FDHHLKKLRKLLNERKKAHAELLRTYLPHNTKIHLNNGGYFIWVELPQTIYAETLYEQAL 421
           +D HL++LR+ L ERK+   + L  YLP   KIH ++ GYF+W+ELP+ + A  L   AL
Sbjct: 360 YDAHLRRLRRQLAERKQRAWQALLRYLPAEVKIHHSDSGYFLWLELPEPLDAGELSLAAL 419

Query: 422 EHNIAIAPGILFSSDKRFSHHIRLNCSYACDERIEQAIQTLGQLI 466
            H+I+IAPG +FS+ + +S   R N ++   ER EQA++ LG+LI
Sbjct: 420 THHISIAPGKMFSTGENWSRFFRFNTAWQWGEREEQAVKQLGKLI 464