Pairwise Alignments

Query, 217 a.a., outer membrane protein W from Vibrio cholerae E7946 ATCC 55056

Subject, 223 a.a., Outer membrane protein W precursor from Sphingobium sp. HT1-2

 Score =  118 bits (295), Expect = 1e-31
 Identities = 78/213 (36%), Positives = 116/213 (54%), Gaps = 7/213 (3%)

Query: 9   AVLAALSSAPVFAHQEGDFIVRAGIASVVPNDSSDKVLN--TQSELAVNSNTQLGLTLGY 66
           A+  AL++AP  A Q GD +VR     V P + S  +L      +++VN+     + + Y
Sbjct: 14  AMGTALAAAPAQAKQ-GDVLVRVRGIMVAPTEKSGSILPGFPGEKVSVNNGIAPEVDVTY 72

Query: 67  MFTDNISFEVLAATPFSHKISTSGGELGSLGDIGETKHLPPTFMVQYYFGEANSTFRPYV 126
           M TD+I FE++AAT   H  S   G  G +G +  T  LPPT  +QY+        RPY+
Sbjct: 73  MATDHIGFELIAATT-KHSASGRSGTTGGIGKLASTWVLPPTLTMQYH-PIVEGHVRPYI 130

Query: 127 GAGLNYTTFFDESFNGTGTNA-GLSDLKLDDSWGLAANVGFDYMLNDSWFLNASVWYANI 185
           GAG+NYT F++E  +G   +A G + + + DS+G A  VG D  LND  FLN  V Y +I
Sbjct: 131 GAGVNYTLFYNEDASGGLEDAVGKTKVHMSDSFGWAGQVGVDIDLNDKIFLNLDVKYIDI 190

Query: 186 ETTATY-KAGADAKSTDVEINPWVFMIAGGYKF 217
           +T      A A  ++  V ++P+VF +  G +F
Sbjct: 191 DTKVRLTTAAAGTQNVKVSLDPFVFGVGVGMRF 223