Pairwise Alignments

Query, 217 a.a., outer membrane protein W from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., Outer membrane protein OprG from Pseudomonas putida KT2440

 Score =  192 bits (489), Expect = 3e-54
 Identities = 102/229 (44%), Positives = 140/229 (61%), Gaps = 14/229 (6%)

Query: 1   MKQTICGLAVLAALSSAPV-FAHQEGDFIVRAGIASVVPNDSS-------DKVLNTQSEL 52
           M +++ G +++A   +AP   A+Q GD I+RAG  +  PN+SS       +KV  T++ L
Sbjct: 1   MNKSLLGASLVALALAAPAAHAYQAGDMILRAGAITTAPNESSGDLKFDGNKVSGTKATL 60

Query: 53  AVNSNTQLGLTLGYMFTDNISFEVLAATPFSHKISTSGGELGSLGDIGETKHLPPTFMVQ 112
             +S+TQLGLT  YM TD+I  E+LAATPF H +   G   G  G + + K LPPT  +Q
Sbjct: 61  --DSDTQLGLTFAYMLTDHIGLELLAATPFKHTVGVKGLGGGLDGKLADIKQLPPTLSLQ 118

Query: 113 YYFGEANSTFRPYVGAGLNYTTFFDESFNGTGTNAGLSDLKLDDSWGLAANVGFDYMLND 172
           YY  E NS F+PY G G+NYT FFDE  +      G S+LKL DS G+A  +G DYML D
Sbjct: 119 YYPMEPNSRFQPYAGVGINYTLFFDEDLSSARKEQGFSNLKLQDSVGIAGQLGMDYMLTD 178

Query: 173 SWFLNASVWYANIETTATYKA----GADAKSTDVEINPWVFMIAGGYKF 217
           +  +NASVWY +I+T A+       G      DV+++PWV+M+  GYKF
Sbjct: 179 NLLVNASVWYVDIDTKASVNGPTALGYSKTKVDVDVDPWVYMVGLGYKF 227