Pairwise Alignments

Query, 217 a.a., outer membrane protein W from Vibrio cholerae E7946 ATCC 55056

Subject, 212 a.a., outer membrane protein W (NCBI) from Escherichia coli BW25113

 Score =  237 bits (605), Expect = 1e-67
 Identities = 116/216 (53%), Positives = 143/216 (66%), Gaps = 6/216 (2%)

Query: 2   KQTICGLAVLAALSSAPVFAHQEGDFIVRAGIASVVPNDSSDKVLNTQSELAVNSNTQLG 61
           K T+  LAV   LS +  FAH+ G+F +RAG A+V P + +   L +    +V +NTQLG
Sbjct: 3   KLTVAALAVTTLLSGS-AFAHEAGEFFMRAGSATVRPTEGAGGTLGSLGGFSVTNNTQLG 61

Query: 62  LTLGYMFTDNISFEVLAATPFSHKISTSGGELGSLGDIGETKHLPPTFMVQYYFGEANST 121
           LT  YM TDNI  E+LAATPF HKI T      + GDI    HLPPT M Q+YFG+A+S 
Sbjct: 62  LTFTYMATDNIGVELLAATPFRHKIGTR-----ATGDIATVHHLPPTLMAQWYFGDASSK 116

Query: 122 FRPYVGAGLNYTTFFDESFNGTGTNAGLSDLKLDDSWGLAANVGFDYMLNDSWFLNASVW 181
           FRPYVGAG+NYTTFFD  FN  G  AGLSDL L DSWG A  VG DY++N  W +N SVW
Sbjct: 117 FRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVW 176

Query: 182 YANIETTATYKAGADAKSTDVEINPWVFMIAGGYKF 217
           Y +I+TTA YK G   +   V ++PWVFM + GY+F
Sbjct: 177 YMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF 212