Pairwise Alignments

Query, 217 a.a., outer membrane protein W from Vibrio cholerae E7946 ATCC 55056

Subject, 210 a.a., outer membrane protein OmpW from Dickeya dianthicola 67-19

 Score =  234 bits (597), Expect = 9e-67
 Identities = 118/210 (56%), Positives = 139/210 (66%), Gaps = 6/210 (2%)

Query: 8   LAVLAALSSAPVFAHQEGDFIVRAGIASVVPNDSSDKVLNTQSELAVNSNTQLGLTLGYM 67
           L ++AA+      AHQ GD IVRAG A+V PN  SD VL   S   VN+NTQLGLT  YM
Sbjct: 7   LMIVAAMIPVLAEAHQAGDVIVRAGTATVRPNAGSDDVLGLGS-FNVNNNTQLGLTFSYM 65

Query: 68  FTDNISFEVLAATPFSHKISTSGGELGSLGDIGETKHLPPTFMVQYYFGEANSTFRPYVG 127
            TDNI  E+LAATPF HKI      +G +G I E KHLPPT M QYYFG++    RPY+G
Sbjct: 66  ATDNIGVELLAATPFQHKIG-----VGGVGQIAEVKHLPPTLMAQYYFGQSTDKLRPYLG 120

Query: 128 AGLNYTTFFDESFNGTGTNAGLSDLKLDDSWGLAANVGFDYMLNDSWFLNASVWYANIET 187
            GLNYT FFDE FN TG +A LSDL L +SWG+AA  G DY LN  W LN SVW+ +I+T
Sbjct: 121 VGLNYTMFFDEKFNQTGKDAQLSDLSLKNSWGVAAQAGLDYNLNKDWLLNLSVWWMDIDT 180

Query: 188 TATYKAGADAKSTDVEINPWVFMIAGGYKF 217
           T  +KAG   +S    ++PWVFM   GYKF
Sbjct: 181 TVKFKAGGQDQSIKTRLDPWVFMFGFGYKF 210